Bradyrhizobium betae: F8237_12625
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Entry
F8237_12625 CDS
T06368
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bbet
Bradyrhizobium betae
Pathway
bbet03030
DNA replication
bbet03410
Base excision repair
bbet03420
Nucleotide excision repair
bbet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F8237_12625 (polA)
03410 Base excision repair
F8237_12625 (polA)
03420 Nucleotide excision repair
F8237_12625 (polA)
03440 Homologous recombination
F8237_12625 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbet03032
]
F8237_12625 (polA)
03400 DNA repair and recombination proteins [BR:
bbet03400
]
F8237_12625 (polA)
Enzymes [BR:
bbet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F8237_12625 (polA)
DNA replication proteins [BR:
bbet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F8237_12625 (polA)
DNA repair and recombination proteins [BR:
bbet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F8237_12625 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F8237_12625 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
WHD_BrxR
Transposase_20
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFI73165
UniProt:
A0A5P6P4M6
LinkDB
All DBs
Position
2630673..2633714
Genome browser
AA seq
1013 aa
AA seq
DB search
MPKTAPKTAAKADSKPAAATAAAKPVAARAAGKGDHIFLVDGSGYIFRAYHALPPLNRKS
DGLQVNAVLGFCNMLWKLLRDMPADNRPTHLAIVFDKSEVTFRNKIYPEYKAHRPPAPDD
LIPQFALIREAVRAFDLPCLEQGGFEADDLIATYARQASDRGATTTIVSSDKDLMQLVND
KITMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIVE
YGDLEQLLFRATEIKQPKRREALIENAEKARISRQLVLLDDKVELEVPLDDLAVHEPDAR
KLIAFLKAMEFTTLTRRVADYSQIDPANVDADVANSSEARGGDGAARTVSSGTSGDLFAT
PPATAKGGDKGDKAASPKGAPISLAAAREEALRKLPVDRGRYQTIKTLAELNAFITRIHD
AGHVAIEVRANSIDPMQADFCGIALALAPNEACYLPLAHKQSGGGAGLFDAGLAPDQVKH
ADAIEALRPVLEASGILKIGFDVKFTAVMLAQHGITLRNTDDAKLISYVLDAGRGSHELD
SLSERWFGHAMLKESELLGSGKGKITFDQVPIDKAAPLSAEGADMTLRTWRVLKPRLVAE
HMTTVYETLERPLVAVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGEPVNV
GSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDLPRKILEWRQVSKLKST
YTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIASPGH
KLVSADYSQIELRLLAEIADIPVLKQAFKDGLDIHAMTASEMFGVPIAGMPSEIRRRAKA
INFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFCRSHGYVTTLF
GRKMYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMIRVEDALAEKKLSAQMLLQ
VHDELIFEVPDAEVAATLPVVQHVMQDAPFPAVLLSVPLHVDARAANNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaccgccccgaagaccgccgccaaagccgattccaagcccgctgctgcgaca
gctgctgccaaaccggtcgcagctagagcagccggcaagggcgaccacatcttcctggtc
gacggttccggctacatcttccgcgcctatcacgcgctgccgccgctgaaccgcaagtcc
gacggcttgcaggtcaacgccgtgctcggcttctgcaacatgctgtggaagctgctccgc
gacatgcccgccgacaaccggccgacgcatctggcgatcgtgttcgacaagtccgaagtc
acgttccgcaacaagatctatcccgagtacaaggcgcaccggccgccggcgcctgacgat
ctgattccgcaattcgcgctgatccgcgaggccgtgcgcgccttcgatttgccttgcctg
gagcaaggcggcttcgaggccgacgatctgatcgcgacctatgcccggcaggccagcgac
cgcggcgccaccacgaccatcgtgtcctccgacaaggatttgatgcagctcgtcaacgac
aagatcacgatgtacgacaccatgaaggatcgccgcatcggcatccccgaggtgatcgag
aagttcggggtgccgccggagaaggtggtcgaggtgcaggcgctcgccggcgattccacc
gacaacgtgcccggcgtacctggcatcggcatcaagaccgcggcgcagctgatcgtcgaa
tatggcgacctcgagcagctgctgttccgtgccacggagatcaagcagccgaagcggcgc
gaggctctgatcgagaatgccgagaaggcgcggatctcgcgccagctggtgctgctcgac
gacaaggtcgagctggaggtgccgctcgacgatctcgccgttcacgagcccgacgcgcgg
aagctgatcgccttcctcaaggcgatggaattcaccacgctgacacgccgcgtcgccgac
tattcgcagatcgatcccgccaatgtcgacgccgacgtggcgaacagcagcgaggcccgc
ggcggcgacggcgcggccaggacggtttcgtcggggacatcaggcgatctcttcgcgacc
cctcccgcaacggccaaaggcggcgacaagggcgacaaggccgcgagccccaagggcgcg
ccaatctcgcttgcggcggcgcgcgaggaggctttgcgcaagcttccggtcgatcgcggc
agatatcaaaccatcaagaccctcgccgagctgaacgccttcataacgcgcattcacgat
gcgggccatgtcgcgatcgaggtccgtgcgaactccatcgatccgatgcaggccgatttc
tgcggcatcgcgctggcgctggcgccgaacgaggcctgctatctgccgctggcgcacaag
cagtccggcggtggcgccggcctgttcgacgccggcctcgcgccggaccaggtcaagcat
gccgatgcgatcgaagcgctgcggccggtgctggaagcatcgggcattctcaagatcggc
ttcgacgtcaaattcaccgccgtgatgctggcgcagcacggtatcaccttgcgcaacacc
gacgatgcgaaattgatctcctacgtgctcgacgccggccgcggctcgcatgagctggac
tcgttgtccgaacgctggttcgggcatgccatgctgaaggagagcgagctgctcggtagc
ggcaagggcaagatcaccttcgaccaggtgccgatcgacaaggccgcgccgctgtcggcc
gaaggcgccgacatgaccctgcgcacgtggcgcgtgctcaagccgcgtctcgttgccgag
cacatgaccacggtctacgagacgctggagcggccgctggtggcggtgctcgcacgcatg
gagcggcgtggcatctcgatcgaccgccaggtgctgtcgcgactgtccggcgacttcgcc
cagaccgcggcgcgcgtcgaagccgagatccaggagatcgcgggcgagccggtcaatgtc
ggcagccccaagcagatcggcgacatcctgttcggcaagatgggactatccggcggcacc
aagaccaagaccggcgcgtggtcgacgaccgctcaggtgctcgacgaactcgccgagcag
ggccacgacctcccgcggaagattctggagtggcgccaggtctcgaagttgaaatcgacc
tataccgacgcgctgccaacctacgtcaatccgcagacccatcgcgtgcacacgacctac
gcgttggctgcgaccacgacgggccggctgtcgtcgaacgagcctaacctgcagaacatt
ccggtgcgcaccgaggacggccgcaagatccgccgcgctttcatcgccagccccggccac
aagctcgtctccgccgactattcgcagatcgagttgcggctgctggcggagatcgccgac
atccccgtgctcaagcaggcgttcaaggacggcctcgacattcacgccatgacggcctcc
gaaatgttcggcgtgccgatcgcgggcatgccgagcgaaatccgccgccgtgcgaaagca
atcaatttcggcatcatctacggcatctcggcgttcggcctcgccaatcagctcggcatc
gcgcgcgaagaggcctccgcctacatcaagaagtacttcgagcgtttccccggcatccgc
gcctatatggacgagacgcgcgatttctgccgcagccacggctatgtcaccacgctgttc
ggccggaagatgtactatcccgacatcaaggcctcgaacgcttcggtgcgcgcgttcaac
gaacgcgccgcgatcaacgcacggctgcagggcaccgccgccgacatcattcgccgcgcc
atgattcgggtggaagacgcgctcgccgagaagaaactctcggcacagatgctgctccag
gtgcacgacgaactgatcttcgaggtcccggacgccgaggtcgcggcgacgctgccggtc
gtgcagcatgtgatgcaggacgcgccgttcccggcggtgctgctgtccgtgccgctgcat
gtcgatgcgcgtgcggcgaataattgggacgaggcgcactga
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