Bradyrhizobium betae: F8237_14695
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Entry
F8237_14695 CDS
T06368
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbet
Bradyrhizobium betae
Pathway
bbet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F8237_14695 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbet03019
]
F8237_14695 (pnp)
03016 Transfer RNA biogenesis [BR:
bbet03016
]
F8237_14695 (pnp)
Enzymes [BR:
bbet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F8237_14695 (pnp)
Messenger RNA biogenesis [BR:
bbet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F8237_14695 (pnp)
Transfer RNA biogenesis [BR:
bbet03016
]
Prokaryotic type
tRNA degradation factors
F8237_14695 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QFI73538
UniProt:
A0A5P6P646
LinkDB
All DBs
Position
3078651..3080807
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNSA
LEKEMLGLVEQELRSAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRISGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMKVALGQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKVGDGEKAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattccgtcgagatcgactggggtggacgccccctcaagctcgaaacc
ggcaagatcgcccgccaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaagtccccgcgcgaaggcgtcgacttcctgccgctgacc
gtcgactaccaggagaagacctacgctgcaggccgcatccccggcggctatttcaagcgt
gagggacgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcgacggctggcgcaacgagacccaggtcatcgtcaccgtgctctcccac
gacatggagaacgatccggacatcgtcgcgctggtggcgtcgtccgctgcgctgaccctg
tcgggcgctcccttcaagggcccgatcggtgctgcccgcgttggctttgccaatgacgag
ttcatcctcaacccgacgctcgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggtaccgccgacgccgtgctgatggtggaatcggaagccaaggaactgaacgaagacatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccgtgatcgacaattcggcg
ctcgagaaggaaatgctcggcctcgtcgagcaggagctccgctccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatcgcccactat
ttccccgaagggcaggagccgaaatacgacaagctccgcatctccggcgtgttcaaggag
ctggaagccaagatcgttcgctggaacatcctcgacaccggcaagcgtatcgacggccgt
gacagcaagaccgtgcgcaacatcatcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgaaacccaggcactggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtccggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggccgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gaattcccctacaccacgcgcgtggtgtcggagatcaccgagtcgaacggctcgtcctcg
atggcttcggtctgcggcgcttcgctcgcgctgatggatgccggcgtgccgttgaagcgg
ccgaccgcgggtatcgcgatgggtctgatcctcgaagacaagcgcttcgcggttctctcg
gacatcctcggagacgaggaccatctcggcgacatggacttcaaggttgccggcacggaa
gcgggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
aaggtcgcgctcggtcaggccaaggatggtcgtatccacatcctcggcgagatggccaag
gcgctcaccaacgcccgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgatggcaccgtgaaggtcgcatcc
tccgacggcgaggcgatgaaggccgcgataaagtggatcaagtcgatcgcgtccgatccg
gaagtcggccagatctatgatggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggctccaaggacggtctcgtccacatcagccagctggcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacacgcctgtcgatgaaggtcgtcgaccagaccaccggcgaagac
ctcgagggcaaggtcggtgacggcgagaaggccccgcgcgaagcggccggcgagtaa
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