Bradyrhizobium betae: F8237_14990
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Entry
F8237_14990 CDS
T06368
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbet
Bradyrhizobium betae
Pathway
bbet02020
Two-component system
bbet02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F8237_14990 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F8237_14990 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbet03021
]
F8237_14990 (rpoN)
Transcription machinery [BR:
bbet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F8237_14990 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QFI73594
UniProt:
A0A5P6P6D4
LinkDB
All DBs
Position
complement(3142907..3144529)
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AA seq
540 aa
AA seq
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MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEPPAGE
APAEAGQYGDSDDFGGGGSDEPGGGPGEAFEPGQEEWMSKDLGTRAEIEQTLDTGLDNVF
SEEPAEAAARNAQDVAPTTYTEWGGGASGDEDYNLEAFVAAETTLGDHLAEQLSVAFAGP
AQRMIGQYLIDLVDDAGYLPPDLGQAAERLGASQQDVDDVLAVLQKFDPPGVCARNLSEC
LAIQLRELDRYDPAMQALVEHLDLLAKRDIAGLRKICGVDDEDIADMIGEIRRLNPKPGM
KFGTARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSELSKKIGKDGDKSYFT
DALQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQMHEST
VSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDSEAPAAILSD
DTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVISTAMSDRSRNTEPA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgcagagattagagttccgacaatcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcaattgtccaatctcgatctcacgaccttcgtggaa
gaggaactcgagcggaacccgctgctggaacgggccaacgacgagccccccgcgggtgaa
gccccggccgaggccggccaatacggcgatagcgacgatttcggcggcggtggcagcgac
gagccgggcggtggcccgggcgaggcgttcgagccgggccaggaagaatggatgagcaag
gatctcggcacccgcgccgagatcgagcagaccctggacacgggcctggacaacgtcttc
tccgaggagccggccgaggccgccgcgcgcaacgcccaggacgtcgcgccgaccacctat
acggaatggggcggcggcgcctccggtgacgaagactacaatctggaagcttttgtcgca
gccgagacaacgctcggcgaccatctcgccgagcagctctcggtggccttcgccgggccg
gcgcagcggatgatcggccagtacctgatcgacctcgtcgacgacgccggctacctgccg
cccgatctcggtcaggccgcggagcgccttggtgcatcgcagcaggatgtcgacgacgtc
ctcgcggtgctgcagaaattcgatcctcccggtgtctgcgcgcgcaatttgagtgaatgc
ctggcgatccagcttcgcgagctcgaccgttacgaccccgcgatgcaggcactggtcgag
catctcgatctgctcgccaagcgcgacatcgcgggcctgcgcaagatctgcggtgtcgac
gacgaggacatcgccgacatgatcggcgagatccgccgcctcaatcccaagcccggcatg
aagttcggcacggcgcggctccagaccatggtgcccgacgtctacgtccgcccgggtccc
gacggtggctggcatgtcgagctcaacagcgacaccttgccgcgcgtgctggtcaaccag
acctactattccgaactgtcgaagaagatcggcaaggacggcgacaagtcctacttcacc
gacgcgttgcagaacgcgacctggctggtgcgcgcgctcgaccagcgcgcccgcaccatc
ctgaaagttgcaaccgagatcgtgcgccagcaggacggcttcttcacgcacggcgtggcg
cacctgcggccgctgaatctgaaggccgttgccgacgccatccagatgcacgaatccacg
gtgtcgcgcgtcaccgccaacaaatacatggcgacaaatcgcggcacattcgagttgaag
tatttcttcacggcgtcgatcgcctcagccgacggcggcgaggcgcattcggccgaagcc
gtgcgtcaccacatcaagcagctgatcgattcggaagcgcccgccgcgatcctgtcggat
gacaccatcgtggaacggttgcgcgcctcgggcattgatattgcccgccgcacggtcgcg
aagtaccgcgaagccatgcgcattccgtcctcggtgcaacgccgccgcgacaagcagagc
gctcttggtaacgtcatctccaccgcaatgtccgatcgctcccgcaacaccgagccggcc
tga
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