Bradyrhizobium betae: F8237_15750
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Entry
F8237_15750 CDS
T06368
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbet
Bradyrhizobium betae
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbet03032
]
F8237_15750
03400 DNA repair and recombination proteins [BR:
bbet03400
]
F8237_15750
Enzymes [BR:
bbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F8237_15750
DNA replication proteins [BR:
bbet03032
]
Prokaryotic type
DNA Topoisomerases
F8237_15750
DNA repair and recombination proteins [BR:
bbet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F8237_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
QFI73731
UniProt:
A0A5P6P620
LinkDB
All DBs
Position
3296542..3297711
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTIRPASADPAAVALAKALGQWPKPAGSGRPSPKKVFDTAPAATVEAIAKELG
LRLGDQNELKIRRIKRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSSH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLAKLVGALPKIRRKVFAFLSGDVPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDCFVLTFKAKGGKAVRKEC
DAAKLVRAIGILQGVPGKRMFQYRDAYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatacggcccgcttcggccgatcctgctgctgtc
gcgctggccaaagccctcggacaatggccgaaaccggccggttccggccgtcccagcccg
aaaaaggtgttcgacacggcgcccgcggcgacggtcgaggcgatcgcgaaggagcttggc
ctgcggctcggcgaccagaacgaactgaagatccggcgcatcaagcgcggcaagggctat
tccttcgtccgccccaatggcgcgcatatccgcgacgcccgcaccatccgccggctgcat
gccatggcggtgccgcccgcctatcgcgaggtgcgctactcggccgatccgagctcgcat
ctgcaggccgtgggacgcgatgcggcgggccggctgcaatatcgctatcacgccgattgg
gagaaagtccgcgagcaccgcaaggcgcatcgcctggcgaagctggtcggcgcattgcca
aagatccggcgcaaggttttcgcgttcctgtcgggcgacgtgccgacccgcgagttcgcg
ctctcggccgtgatcgagctgatcgcgcggaccgcgatccgtcccggcaatgaatcctat
gcccgcctcaacggcacgcgcggtgcgaccacgctgctgaagtccaatgtcacgctggaa
gacgattgcttcgtgctgaccttcaaggcgaagggcggcaaggccgtgcggaaagaatgc
gacgcggccaagctggtgcgcgcgatcggcatcctgcagggcgttccaggcaagcgcatg
ttccagtatcgcgacgcctacggcatcgtgcgcgcggtcagcaccacacaggtgaacgcg
ttcctgcgcgagatcgccggcatcaagatttcactgaaggatttccgcaccctgatggcc
tccgccgtcgtcgtcgaatcgctgtcgcggatcacgccggcgaccagccagcgcggccgc
aagaagcaggtgctggatgcgatccgcgccgccgccgacaagctctccaacacgccggcg
atctgccgcaagagctacgttcacgacaccatcgtcaccgccttcgaggacggcattctg
gagcgctttgcagcgacgatgaagggccagcgttcgcaggccaggcgcgagcagctgttg
cagcaggtggtcgcgaccgcggcggtgtaa
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