Bradyrhizobium betae: F8237_16300
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Entry
F8237_16300 CDS
T06368
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bbet
Bradyrhizobium betae
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbet03016
]
F8237_16300 (thpR)
Enzymes [BR:
bbet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
F8237_16300 (thpR)
Transfer RNA biogenesis [BR:
bbet03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
F8237_16300 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QFI73833
UniProt:
A0A5P6P8S5
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All DBs
Position
3404884..3405420
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEVGQTLSNLRGGLPGARWIDPENYHVTLRFIGDIDGMSANEIASMLFR
VDRKPFEVKVQGLQSFGGRKPRAVVATIAPSKPLMELQAELERMMQRIGLNPEGRKFIPH
VTLARLHDATDRDVADYLSLRGYFPSKAFMAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcactggtctggaaatcccggccgaggtcggccagacgctttccaat
ttgcgaggcggcctccccggcgcccgctggatcgatcccgaaaattatcacgtcaccctg
cgcttcatcggcgatatcgacggcatgtccgccaacgagatcgcctcgatgctgtttcgc
gtcgaccgcaagccgttcgaggtgaaggtgcagggcctgcaaagcttcggcggccgcaag
ccgcgtgcggtggtcgccaccattgcgccgagcaagccgctgatggaattgcaggccgag
ctcgaacgcatgatgcagcggatcggcctcaatcccgaaggccgcaagttcatcccgcac
gtcacgctggcccgtctgcacgacgccaccgaccgcgacgtcgccgactatctctcgctg
cgcggctacttcccgagcaaggcgttcatggcggaacgtttcgtcttgttttcgtcgcgc
gcatcgaccggcggtggtccgtatgtggtcgaggacgcgtacgagctgtgtgagtag
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