Bradyrhizobium betae: F8237_20830
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Entry
F8237_20830 CDS
T06368
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bbet
Bradyrhizobium betae
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbet01002
]
F8237_20830
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbet01011
]
F8237_20830
Peptidases and inhibitors [BR:
bbet01002
]
Cysteine peptidases
Family C82
F8237_20830
Peptidoglycan biosynthesis and degradation proteins [BR:
bbet01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
F8237_20830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QFI74636
UniProt:
A0A5P6P8P4
LinkDB
All DBs
Position
complement(4380451..4382652)
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AA seq
733 aa
AA seq
DB search
MRDCLNHRAGFDRVLMTVAATFLTVSASSALAQDQARSSAAELAIEAAIPRPEPANVAPP
TAADIKLDSTATVQDSAKEQTKEPVKAEAAPAPAKVDTKPSDVATTPAPEAPKSETAKSE
PAKSEPAKSEPVKAETATATPAAPAAPAAAAPAAEPVKAASNVPAADQPVADKLKDIIGA
KTSRHFDRKNERAAVEKFYGARDFAPVWTQGGSLTAAAKGVIARLKDAASDGLNPADYPV
PDFAAATNPDALADAELKLTASMFDYARQAQSGRMHWSQVSGDILYPEHPVDPGEVLAKI
TTATDASAALDSYNPPQKLYKELKAKLAELRGQGNGPVIEIADGPALKYTPAGKKQAEIV
VEDPRVPQLRAKLGLAENVSDTRYDAAVAEAVRKFQNSAELKATGILDDKTVKAINTPKR
DKQIDVVLVNMERWRWLPRDLGVPSLGDAYVILNIPDYTLKVMQRGQQVWTTRVVTGKPG
THATPLLTETMKYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHIS
QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFARDDRAFSHGCMRVQNPDQYASVLLNI
ALPNEKYTPERVRSMYGKSEIDLKFPTPIPVNITYQTAFVDDGGKLQFRKDVYGRDATMI
NILKNSRGKDLENIVAHSQPSYSRPATTLPNGVAVANNGGSSGPNFFERLFGAPTPPPAP
VGRRPQQQRVFTR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgtttgaaccaccgtgcaggctttgaccgcgttttgatgacggtcgcggca
accttcctcacggtatcggccagctcggccctggcacaggatcaggcgcgcagcagcgcc
gccgagctcgcgatcgaagccgcgatcccacgccccgagccggcaaacgtcgcccccccg
accgcagcggacatcaagctcgacagcaccgccacggtgcaggactccgcgaaggagcag
accaaggaacccgtgaaggccgaagccgcaccggcacctgccaaggtcgacaccaagcct
tccgacgtggccaccacgcccgcgcccgaggcgccgaagagcgagacggccaaatctgaa
ccagccaaatctgaaccagccaagtctgaacctgtaaaggccgaaactgcgacggcaacg
ccggctgcgcctgcggcccccgccgcagcagctcccgccgcggagccggtgaaggctgcg
agcaacgttcccgccgcggaccagccggtcgccgacaagctcaaggacatcatcggcgcc
aagacctcgcgccatttcgaccgcaagaacgagcgcgcggcggtcgagaagttctacggc
gcacgtgacttcgcgccggtctggacgcaaggcggcagcctgaccgctgcggccaagggc
gtgatcgcgcggctgaaggatgccgcctcggacggcctcaatccggccgactatccggtg
ccggatttcgccgccgccactaaccccgatgcgctcgccgatgccgagctgaagctcacc
gccagcatgttcgactatgcgcgccaggcccagagcggccgcatgcactggtcccaggtc
agcggcgacatcctctatcccgagcatccggtcgatccgggcgaggtgctcgccaagatc
acgaccgcgaccgacgcctccgctgcgctcgacagctacaacccgccgcagaagctctac
aaggaactgaaggccaagctcgcagagctccgcggccagggcaacggcccggtgatcgag
atcgccgacggtccggcgctgaaatacaccccggccggcaagaagcaggctgaaatcgtc
gtggaagatccgcgcgtgccgcagctccgcgccaagctcggtctcgccgagaacgtcagc
gacacccgctatgacgcggcggtcgccgaagccgtgcgcaaattccagaacagcgccgag
ctgaaggcgaccggcatcctcgacgacaagaccgtcaaggcgatcaatacgccgaagcgc
gacaagcagatcgacgtcgtgctggttaacatggagcgctggcgctggctgccgcgcgac
ctcggcgtgccctcgctgggcgatgcctatgtcattctgaacattcccgactacacgctg
aaggtgatgcagcgcggccagcaggtctggaccacccgcgtcgtcaccggcaagccgggc
acgcatgcgacgccgctgctgaccgagacgatgaaatacatcacggtcaacccgacctgg
aacgtgccgccgtcgatcgtctacaatgaatatctgccggcgcttcagcaggacccgacc
gtgctccagcgcatgggactcaagctcgagcagaaccgcgacggctcggtgcacatctcc
cagccgcccggtgaagccaacgcgctcggccgcatccgcttcaacttcccgaacaagttc
ctggtctatcagcacgacacgccggacaagaacctgttcgcgcgggacgatcgcgccttc
agccacggctgcatgcgggtgcagaacccggatcagtacgcctcggttctactcaacatt
gccttgccgaacgagaagtacacgccggagcgcgtgcgcagcatgtacggcaagagcgag
atcgacctgaaattcccgaccccgatcccggtcaacatcacctatcagaccgcgttcgtg
gatgacggcggcaagcttcaattccgcaaggacgtctatggccgcgacgcgaccatgatc
aacatcctgaagaacagccgcggcaaggacctcgagaacatcgtggctcactcgcagccg
agctattcgcgcccggcgacgacgctgccgaacggcgtggcggtggccaacaatggcggc
tcgtccggcccgaacttcttcgagcggctgttcggggccccgaccccgccgccggctccg
gtcggccgccgtccccagcagcagagggtattcacccgctga
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