Bradyrhizobium betae: F8237_29300
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Entry
F8237_29300 CDS
T06368
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bbet
Bradyrhizobium betae
Pathway
bbet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F8237_29300 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbet03021
]
F8237_29300 (rpoB)
03400 DNA repair and recombination proteins [BR:
bbet03400
]
F8237_29300 (rpoB)
Enzymes [BR:
bbet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F8237_29300 (rpoB)
Transcription machinery [BR:
bbet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F8237_29300 (rpoB)
DNA repair and recombination proteins [BR:
bbet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F8237_29300 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QFI76133
UniProt:
A0A5P6PFK8
LinkDB
All DBs
Position
6103150..6107274
Genome browser
AA seq
1374 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPVGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLMFALGLDGEAILSTFYKKILYKRT
KEGWRVPFDANRFRGYSTINDLIDADTGKVVLEAGKKLTVRGARQMQEKGLKALRLSDEE
LVGNYLAEDLVNPKTGEIHAEAGEEITDKSMKALNEHGYKELPLLDIDHVNVGAYIRNTL
SADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILSVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYSVAQANVPIDAKGRFTEDLVVCRSSGTRDVVPMTPDK
VDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVA
RDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPL
VKVGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTS
IHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIER
EEIERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQW
WLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHL
GWACAGLGKRIGQTVDAYLSKQDIRPLKETLKKVYGEDETIKSLNDNELIELGHNLSRGV
PIATPVFDGAKEADIEEMLKLAGLDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVD
DKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAG
RTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKVGPAPTSEAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttctttggacacatcaag
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcatcctatgaccagttcctg
atggtcgatgaacccgtgggcgggcgtctcgacgagggcctgcaggccgtgttccgttcc
gtgttcccgatctccgacttctccgggacctcgatgctggaattcgtccgttacgagttc
gagcagccgaaatacgacgtcgacgagtgccgccagcgcggcatgaccttcgcggcaccg
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgcgaagtcg
gtgaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcatcgtcaacggcaccgagcgcgttatcgtctcgcagatgcaccgttcgccc
ggcgtgttcttcgatcacgacaagggcaagacccattcctcgggcaagctgctgttcgct
gcccgcgtcatcccgtatcgcggttcctggctcgacatcgagttcgacgccaaggacatc
gtttatgcgcgtatcgatcgtcgccgcaagattccggtgacgtcgctgatgttcgcgctc
ggcctcgacggcgaggcgatcctgtcgacgttctacaagaagattctctacaagcggacc
aaggaaggctggcgcgttccgttcgacgccaaccgtttccgcggctactcgaccatcaac
gacctgatcgacgcggataccggcaaggtcgtgctcgaggccggcaagaagctcaccgtg
cgcggtgcgcgtcagatgcaggaaaagggcctgaaggcgctgcgcctgtcggatgaggaa
ctcgtcggcaactatctggccgaggacctcgtcaatcccaagaccggcgagattcacgcc
gaagccggtgaagagatcaccgacaagtccatgaaagccctcaacgagcacggctacaag
gaattgccgctgctcgacatcgaccatgtcaatgtcggcgcctacatccgcaacacgctt
tcggccgacaagaacatgacgcgtgaggacgcgctgttcgacatctaccgcgtgatgcgt
ccgggcgagccgccgacgctggattcggcgcaggcgatgttccagtcgctgttcttcgac
gccgagcgttacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgacacccagcgcacgctgcgcaaggaagacatcctctccgtcatcaagacg
ctggtggacctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgctcggtcggcgagctcatggagaaccagtaccgcatcggcctgctgcgcatg
gagcgcgcgatcaaggagcgtatgtcctcggtcgacatcgacacggtcatgccgcaggac
ctgatcaacgccaagccggcggctgccgcagtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgtctttcg
gcgcttggtccgggcggtctgacccgcgagcgtgccggcttcgaggtgcgcgacgtgcat
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggcccgaacatcggtctg
atcaactcgctcgccaccttcgcgcgcgtgaacaaatacggcttcgtcgagacgccttat
cgcaaggtgaaggacggccgcgtcaccgacgaggtcgtgtacctctcggcgatggaggag
ggccggtactcggtcgcgcaggccaacgtgccgatcgacgccaagggtcgtttcaccgaa
gatctggtcgtctgccgctcgagcgggacgcgcgacgtcgtgccgatgacgcccgacaag
gtcgactacatggacgtgtcgccgaagcagctggtttcggtcgccgcggcgctgatcccg
ttcctcgagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcg
gtgccgctggttcgcgccgaggctccgttcgtcggcaccggcatggaaggcgtcgttgcg
cgcgactcgggtgccgcgatcgcggcgcgccgttcgggcgtgatcgaccagatcgacgcg
acccgcgtcgtaatccgcgccacggaagatctcgatccgaccaagtcgggcgtcgatatc
taccggctgatgaagtaccagcgttccaaccagtcgacctgcatcaaccagcgtccgctg
gtgaaggtcggcgacatcgtcaagaagggcgacatcatcgctgacggtccgtcgaccgat
ctcggcgagctcgcgctcggccggaacgtgctcgtcgcgttcatgccgtggaatggctac
aacttcgaagactcgatcctgctctccgagcggatcgtgaaggaagacgtcttcacctcg
attcatatcgaagaattcgaggtgatggcccgcgacaccaagctcggacccgaggaaatc
acccgcgacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggtatc
gtctacatcggcgcggaagtgcgcgccggcgacatcctggtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaagagaagctcctgcgcgccatcttcggcgaaaaggct
tccgacgttcgtgacacctcgctgcgcgttcctccgggcgtgcagggcacgatcgtggaa
gtgcgcgtgttcaaccggcacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgg
gaagagatcgagcgtctggccaaggaccgcgacgacgagcaggcgatcctggaccgcaac
gtctacaaccgtcttgccgagctgctcgaagggcggcagggcattgccggtccgaagggc
ttcaagaaggacaccaagatcacccgtgcggtgctcgaggagtatccgaagtcgcagtgg
tggctgttcgcttcgccgaacgacaagctgatggccgagatcgaggccatgcggaagcag
tacgacgagtcgaagaaggggctggaacagcgcttcctcgataaggtcgagaagcttcag
cgcggtgacgaattgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaag
cgcaagatccagcccggcgacaagatggctggccgccacggcaacaagggcgtggtgtcg
aagatcgtgccgatcgaggacatgccgttcctcgaagacggcacgcatgccgacatcgtg
ctcaatccgctcggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctc
ggctgggcctgcgccggcctcggcaagcgtatcggccagacggtcgatgcctacctgtcg
aagcaggacatcaggccgctgaaggaaaccttgaagaaggtctacggcgaggacgagacg
atcaagtcgctcaacgacaacgaactgatcgagctcggccacaatctgagccgcggcgtg
ccgatcgcaacgccggtattcgacggcgccaaggaagccgacatcgaggagatgctgaag
cttgccggtctggacgcttcgggtcagtcgaccgtctatgacggccgcaccggcgatgcg
ttcgatcgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctggtcgac
gacaagatccacgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctgggc
ggcaaggcgcagttcggtggccagcgcttcggcgaaatggaggtgtgggcgctcgaggct
tacggcgcggcgtacacgctccaggagatgctgacggtgaagtcggacgacgtcgccggc
cgcaccaaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggccggtattccg
gaatcgttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcac
aattccaaggtgggaccggcaccgacgtcggaagcggccgagtaa
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integrated database retrieval system
