Bradyrhizobium betae: F8237_34155
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Entry
F8237_34155 CDS
T06368
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbet
Bradyrhizobium betae
Pathway
bbet03410
Base excision repair
bbet03430
Mismatch repair
bbet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F8237_34155 (recJ)
03430 Mismatch repair
F8237_34155 (recJ)
03440 Homologous recombination
F8237_34155 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbet03400
]
F8237_34155 (recJ)
DNA repair and recombination proteins [BR:
bbet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F8237_34155 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F8237_34155 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F8237_34155 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
QFI76992
UniProt:
A0A5P6PF49
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All DBs
Position
complement(7103798..7105639)
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AA seq
613 aa
AA seq
DB search
MSPPATVLPVEAPQAFLGVARSLTDKLWRTRLDARGAATALAIVQRHQLPELLARVLAGR
GVDIDAVPDFLDPTIRKLMPDPFTVTEMEAASKRIADAAVRGETVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVDAVRGLAAKGATLLVTVDCGTTSIEPLAEAK
RLGMSVVVIDHHQAGTELPEVDALVNPNRLDDLSGLGHLAAVGLVLVTLVAVNRELRQRG
FWTSEMPEPDLLGMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDSVEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASIGLEDRIGVIVTASEGWHPGVVGLVASRLKEKFSRPAFAIALEPGG
IGTGSGRSIAGVDIGKAVRQAVADGILLKGGGHAMAAGVTLRKEKLAEFRAYLESALAQD
VAEARHVNELYIDGAVSARAVTTELAATLNRAGPFGSGNPEAVLALPAHQLVYADEVGQA
HLRLRFKSGDGAIVNGIAFRSVGQKLGNALVANRGQQLHVAGSLSVDRYQGAERVQFRVI
DVALPDQGPSVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcccgctaccgtcttgcccgtcgaagcaccccaggccttcctgggcgtggcg
cgctcgctcaccgacaagctctggcgcacccggctggatgcgcgcggcgccgccacggcg
ctcgccatcgtgcagcgtcaccagctgccggaattgctggcgcgggtgctggccggccgc
ggcgtcgacatcgacgcggtgcccgatttcctcgatccgaccatccggaaactgatgccg
gatccgttcacggtgacggagatggaagcggcatcgaagcgcatcgcggacgccgcagtg
aggggcgagaccgtcgcgatcttcggcgactacgacgtcgacggcgcgacgtcggcggcg
ctgctcgcctggcatctgcgccattgcgggcttgacccgctgatccacattcccgaccgc
atcttcgagggctacggccccaacgtcgatgccgtgcgcgggctggcggccaagggcgcc
acgctgctcgtcaccgtcgattgcggcaccaccagcatcgagccgctggcggaggcaaag
cgcctcggcatgtccgtggtggtgatcgaccatcaccaggccggcacggaattgccggag
gtcgatgcgctggtcaatccgaaccggctcgacgatctctccggcctcggccatctcgcc
gccgttggcctcgtgctggtgacgctggtcgcggtcaaccgcgagctgcgccagcgcggc
ttctggacatctgagatgcccgagcccgatctgctcgggatgctgcatcacgtcgcactc
ggcaccgtcgcggacgttgcgccgttgatcggcctgaaccgcgccttcgtcgccaagggg
ctgatcgcgatgcggcggcgcgaccatgtcggccacaccgcgctcatggacgtggcgcga
ctcaacgggccgccggaggcttggcatctcggcttcatgctggggccgcgcatcaatgcc
ggcggccgcatcggccgcgccgatctcggcgtgcggctcttgctcgaaggcgacagcgtc
gaggcggcgcggatcgcggccgagctcgaccgcctgaacagcgagcgtcgtgtcatcgag
caggcggcggaagcgcaggccgaagccgaggcgctggcctcgatcgggctggaggataga
attggcgtcatcgtcacggcctcggaaggctggcatcccggcgtggtcggtctcgtggcc
tcccggctgaaggagaagttttcgcggcccgcctttgcgatcgcgctggagcccggcggc
atcggcaccggctcgggtcgctcgatcgccggcgtcgacatcggcaaggcggtgcggcag
gcggtcgccgacggcattttgctcaagggtggcggccacgcgatggccgcgggcgtgacg
ctgcgcaaagaaaagctcgccgagtttcgcgcctatctcgaaagcgcgctggcgcaggac
gtcgccgaggcccgccacgtcaacgagctctacatcgacggcgcggtctccgcgcgcgcg
gtgacgaccgagcttgcggctacgctcaaccgcgccggcccgttcggcagcggcaatccg
gaagccgtgctggcgctgccggcgcaccagctcgtctatgccgacgaggtcggccaggcg
catctgcgcctgcgcttcaagtcgggtgatggcgccatcgtcaatggcatcgcgttccgc
tcggtcggccagaagcttggcaacgcgctcgtcgccaatcgcggccagcaattgcatgtc
gcgggatcgttgtccgtggatcgctaccagggcgccgagcgcgtgcagttccgcgtcatc
gacgtcgcgctaccggaccaggggccatccgtgattagataa
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