Salisediminibacterium beveridgei: BBEV_0083
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Entry
BBEV_0083 CDS
T05114
Symbol
ywbD
Name
(GenBank) Putative ribosomal RNA large subunit methyltransferase YwbD
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
bbev
Salisediminibacterium beveridgei
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbev03009
]
BBEV_0083 (ywbD)
Enzymes [BR:
bbev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
BBEV_0083 (ywbD)
Ribosome biogenesis [BR:
bbev03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBEV_0083 (ywbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
TRM5-TYW2_MTfase
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
AOM81478
UniProt:
A0A1D7QR57
LinkDB
All DBs
Position
80660..81856
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AA seq
398 aa
AA seq
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MKDVKVKIQQGEVKRYKEGFPLITRDALVNPEVLAEEGQLLEVTDEWGQFIGNGYYGEQN
KGVGWIVTRQAADKINQQLIDRLVLKAVGIRQAYYEDTAMDAFRVFNGEGDGFGGVIIDY
YKQYYVIHFYSEGAYRFKEQFVDSLLRNTDVIGIYEKKRFAKEGQYVEDDDFVTGEEAPS
PLIVNENNVNIAVYLNDGAMVGFFHDQREVRKSILEKYAKGRTVLNTFSYTGVFSVFAAV
GGSLKTTSVDAANRSKEKTAEQFAMNQLDHQDHDIIVDDAFQFLKRTQRRDRTFGLVILD
PPSFARTKKTTFSAKKDYAKLLVDAIHVTEDNGIIVAALNHAGVAPQRFRKTVGEAFQNA
GVPFRVLESFGLPGDFKTDEAFKEGKYLKVLVLQRKDS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtaaaagtaaagatccagcaaggggaagtcaaacgctacaaggaaggcttt
ccgctgatcacaagggacgctttggtgaatcctgaagtgttagccgaggaaggacagctc
cttgaagtcaccgatgaatggggccagtttattggtaacgggtattacggtgaacaaaac
aaaggcgttggctggattgtcaccaggcaagcggccgataaaatcaatcagcagctgatt
gaccggctcgttttaaaagcggtcggcatcagacaggcgtattatgaggacacggcaatg
gacgcttttcgcgtattcaacggcgaaggcgacggttttggcggggtcatcattgattac
tacaagcagtattatgtgattcatttttacagtgaaggcgcctaccgcttcaaagagcag
tttgtggacagccttttgcgaaacacggacgtcatcggcatttatgaaaagaaacgtttt
gcaaaagaaggccagtatgtggaagatgacgatttcgtcaccggcgaagaagccccgtca
cctctgatcgtaaacgagaacaatgtgaatattgccgtttacttgaatgacggtgcgatg
gtcggctttttccatgatcaaagagaagtgagaaagtcgatcctcgagaagtatgccaag
ggcaggaccgtgttgaataccttctcgtacacgggcgttttctccgtatttgcagctgtt
ggcggatcgttgaagacgacgagtgtcgacgcagcaaaccggagcaaggaaaaaacggcc
gaacagttcgccatgaaccagctggatcaccaggaccatgacatcatcgtcgacgacgca
tttcaatttttgaagcgtacccagcgaagggaccggacgtttggtctcgtcattctagat
ccgccgagctttgcacgcacaaagaagacaaccttcagtgccaaaaaggattatgcgaag
ctgctcgtcgatgccattcacgtgactgaggacaacgggattatcgtcgcagccctgaac
catgcaggtgtcgccccccagcgcttcagaaaaaccgtcggggaagcctttcagaacgca
ggcgtgccgtttcgggtcctcgagagcttcggcttgccaggggatttcaaaacggacgag
gcgtttaaagaggggaaatacttgaaagtactggtactgcagcgaaaagacagctga
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