Salisediminibacterium beveridgei: BBEV_0560
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Entry
BBEV_0560 CDS
T05114
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBEV_0560 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbev03400
]
BBEV_0560 (uvrA)
DNA repair and recombination proteins [BR:
bbev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBEV_0560 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBEV_0560 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_33
AAA_22
nSTAND3
AAA_23
AAA_14
Viral_helicase1
cobW
Septin
Motif
Other DBs
NCBI-ProteinID:
AOM81953
UniProt:
A0A1D7QSH7
LinkDB
All DBs
Position
640261..643134
Genome browser
AA seq
957 aa
AA seq
DB search
MALENLKVKGARSHNLKNIDVTIPRDQLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGRP
VCPKHGIEISSQTVPNMVDQVLDYPDRTKLQILAPVIAGRKGQHKKQLEELKKAGYVRIR
VNGEMMEAAATDELDLNKNQKHNIEVVIDRIVIKDGIRSRLTDSIETALKLGDGQVIVDV
IDDEELLFSQRHACPHCGFSVGELEPRMFSFNSPFGACDSCDGLGMRLEVDEELVIPNRN
LSLSDDAILAWKPTSSNYYPSLLASVCDHFGIDMTIPVNELPEDHLNLIMNGNREESFIF
RYENEFGKVREKEMFFEGVMQNIARRYHETSSDYIREQMESYMAEHACPKCHGRRLSPEA
LSVKVAGRHIGEVTQQSIQEAKVFFSDLELSEKDMTIARMILHEIHERLGFLVNVGLEYL
TLSRSAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNHRLIETLKRMRDLG
NTLIVVEHDEDTMLAADHLIDVGPGAGVHGGEICATGTPEEVMATKGSLTGEYLSGKRFI
PLPLKRRPVTDRKLIIEGAAANNLKQETVEIPLGVFLTVTGVSGSGKSTLINDILFKSLA
QRLTVAKDKPGKHKQIKNMDLLDKVVDIDQSPIGRTPRSNPATYIGVFDHIRDVYAMTNE
AKVRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEECDGKRYNRDTLEVLY
KGKNIAEVLEMTVEDAMTFFENIPRIKRKIDTLFDVGLGYMKLGQPSTTLSGGEAQRVKL
ASQLHRRSTGKSLYILDEPTTGLHVHDIDRLLHVLQRLVENGDTVLVIEHNLDVIKTADY
IIDLGPEGGDKGGSLVAEGTPETVAEVSGSYTGKYLKPVLERERKRMEERIQKKAAR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaaaatctgaaagtcaagggagcacgctctcataacctgaaaaatattgat
gtgaccataccgcgggatcagctggtggtcatgaccggcctgtccggctcagggaaatca
tccctcgcgtttgatacgatctatgctgaaggacaaagacgctacgtggaatcactgtcc
gcctatgcgaggcagttcctcggtcagatggacaaaccggatgtggatgccatcgaaggc
ctctctccggcgatttccatcgatcaaaaaacgacgagccgaaacccgcgctcgacggtg
gggaccgtgacggagatctacgactacctgcgtctgctttatgcccgtgtcggtcgaccg
gtctgtccaaagcacggcattgaaatctcgtcacagacggttccgaatatggtggatcag
gtactcgactatccggaccgcacgaagctgcagatccttgccccggtgatcgccggtcgc
aaagggcagcataaaaagcagcttgaagaattgaaaaaagcaggctatgtccgcattcgt
gtgaacggcgagatgatggaagcggcagcgacagatgagctggatctcaataagaatcaa
aaacataatatcgaagtggtcatcgaccggattgtcatcaaagacggcattcgttcgcgc
ttgaccgactccatcgaaaccgctttgaaactgggagacggccaggtgattgtcgatgtc
atcgatgatgaagaactgctcttcagccagcgccacgcctgtccgcactgcggattttcc
gttggtgaactggaaccaagaatgttttcgtttaacagtccattcggcgcctgtgacagt
tgcgacggactcggtatgcgtctggaggtggacgaggagctggtgattccgaaccgaaac
ctgagtctctctgatgatgcgatcctcgcctggaagccgaccagttcaaactactatccg
tcacttctcgcatcggtttgtgatcatttcgggattgatatgacgattccggtcaatgag
ctgccagaggaccacctgaacctgattatgaacggcaaccgtgaagaatcattcatcttc
cgctacgagaatgagttcggaaaagtcagggaaaaagaaatgttttttgagggcgtaatg
caaaatatcgcccgccgttaccatgaaacgtcctcggattacattcgtgaacaaatggaa
agttatatggccgaacatgcctgtccaaagtgtcacgggcggcgattgtcccccgaggcc
ttgtctgttaaagtcgccggacggcatattggagaggtgacccagcagtccattcaggaa
gcgaaagtttttttcagtgacttggaactgtccgaaaaggacatgaccatcgcaaggatg
attttgcatgaaattcatgaacggctcggctttttggtcaatgtcggattggagtatttg
acattgtcccgatcagcgggaaccctctccggcggtgaagcgcagcggatccgcctcgca
acgcaaatcggttcttcattaatgggcgtactctatattctggatgaaccgtcgatcggt
ctgcatcaacgggacaatcaccggttgatcgagacgttaaaacggatgcgggatttgggc
aataccctgatcgtcgttgagcatgatgaagatacgatgctcgcagccgatcatctgatt
gacgtaggaccgggtgcaggcgttcacggtggagaaatctgtgccaccggaacaccggaa
gaagtgatggcgacaaagggctccttaaccggcgaatacctctcgggaaaacggttcatc
ccgctgccattgaagcgccggcctgtcacagaccggaaactgatcatcgaaggagcagcg
gcgaacaacctgaaacaagagacggtggaaatcccgctcggtgttttcctgaccgtcacc
ggggtgtccggatcgggaaagagtacgctgattaacgacatcctcttcaaatccctggcc
cagcggctcaccgtcgccaaagacaagccgggtaagcataaacagatcaaaaacatggat
ttactcgataaagtggtggacattgaccagtcaccgatcggaaggaccccaaggtcgaat
cccgccacatacatcggcgtgtttgaccatatccgggatgtttacgcgatgacaaatgaa
gcgaaagtgagaggttacaagaagggccgtttcagcttcaatgtaaaaggcgggcgctgt
gaagcctgccgcggtgacggtatcatcaaaatcgaaatgcactttctgcctgatgtctac
gttccgtgtgaggagtgcgacgggaaacgttataaccgggataccctggaagttctctat
aaaggcaaaaacattgcggaagtattggagatgaccgtggaagatgcgatgacctttttt
gagaacatcccgcgcatcaagcggaaaatcgatacgctcttcgatgtggggctcggttac
atgaaactgggtcagccgtccacgaccctctccggcggtgaagcgcaacgggtgaaactg
gccagccagttgcaccggcgctcaacgggcaagagtctgtatatcctcgacgagccgacg
accggcctgcatgttcatgacatcgaccgcttgctccacgtcttgcagcgactcgtggag
aacggagacaccgtgcttgtgattgagcacaatctggatgttattaagacagcggattat
atcattgacctgggtcctgaaggcggcgataaaggcgggagcctcgttgctgaagggacg
cctgaaacggtggcggaagtgagtggttcgtacacagggaagtatttgaaacctgtcctt
gagcgggaacgtaaacgtatggaagagcgcattcagaagaaagcagccaggtag
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