Salisediminibacterium beveridgei: BBEV_0881
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Entry
BBEV_0881 CDS
T05114
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev03030
DNA replication
bbev03430
Mismatch repair
bbev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBEV_0881 (dnaE)
03430 Mismatch repair
BBEV_0881 (dnaE)
03440 Homologous recombination
BBEV_0881 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbev03032
]
BBEV_0881 (dnaE)
03400 DNA repair and recombination proteins [BR:
bbev03400
]
BBEV_0881 (dnaE)
Enzymes [BR:
bbev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBEV_0881 (dnaE)
DNA replication proteins [BR:
bbev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBEV_0881 (dnaE)
DNA repair and recombination proteins [BR:
bbev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBEV_0881 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
CcmE
Motif
Other DBs
NCBI-ProteinID:
AOM82252
UniProt:
A0A1D7QT98
LinkDB
All DBs
Position
975028..978411
Genome browser
AA seq
1127 aa
AA seq
DB search
MAYTHLHIHTEFSLLTSLVRIQELVKRAKKQGFTALAITDKNNMYGTAAFYQACVKEDIK
PILGAELTVSRNEPERGNAAAYTLLFYAKTYAGYQSLVQLATLAASREGLPFVTLEEVRS
KAEDLLIISPFSSGEMQSLAEAGDKEAASDFLGQLKAIAGPKSVYVEIQNHWLPWERMRM
QSIRHWLTANQVQVVATNHVHFFDKSQFNAAGTLQAIREGTSTKAMDDSLLSPEMYLKSE
QEMQEQFAKWRQALDVTNTIADQCEVELPFGGKILPSYPLEPGQETSQVLRDWCEKGLTA
RVSDPDEAYQERLKKELRVIREMGYEDYFLIVADFMRFAHDQGILTGPGRGSAAGSIVAY
VLGITDVDPLAYDLLFERFLNPERVSMPDIDIDFSDRSRDKVIHYVQHRYGSSHVAQIIT
FGTLAAKAALRDTARALEIPVSEVDQLTRQVPSRPNITLDEAYAESGSFRELLEAMPSGR
DLFDTAKAIEGLARHTSIHAAGVVMSEHPLTDVVPLESGHDGLFLTQYPMNDLEALGLLK
MDFLGLRNLSFMERIRELVYEKNGEWLDVTRLPIEDDQMFALFAKGATNGIFQLESQGMR
RVLKQLRPSRFEDIVAVNALYRPGPMEQIPTFIARKNGEEPISYPHADLETILKPTYGVM
IYQEQIMQIAAVMAGFSLAEADLLRRAVSKKKKEELDRSRTLFVSGAEGKGYSTAEAESV
YDLIERFANYGFNRSHAVAYSMISCRLGWLKTHHPDAFMAALMEQTVHAPDKLVSFMAEA
RDMNLMVSGPSVQHSGLGVSVVERAIYLPLTVIRYTGVQAIEEIVRVRGLEGPFTSLFDF
CKRVSLKKVNRRAIESLIMAGAMDDFGVERTTLFASLDDAIQYGDEEGKGFSLFDQEGGE
PAYTTGGKMTLMNKLDEEQEAMGFYMSGHPVEDYEELLRPFNKMSIHEAIDTHGQSGKTV
RVAGMVEKVRYVQTKKGEQMAFIHITDETGGLDVTVFPKVLKNHQMSLKKQELVFLEGQM
QWRQDQWNLIMEKAITIDMLKMRKKDKQQPVLYLFISLLHEKTGKGEAVKEVLQDTPGDV
PVVIKYESSGEVKKLSELWNIAAEDELLMKLEGILGKKNVHFRSSRV
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtatactcatttacatattcatacagaattcagcttactgacgagtctcgtcagg
atacaggaactggtgaaacgtgcgaagaaacagggatttaccgcacttgcgatcacggat
aagaacaatatgtacggaaccgccgccttttaccaggcatgtgtaaaggaggacatcaag
ccgattctcggtgcagaactgaccgtgtcccgaaatgaaccggaaagaggcaatgcagcc
gcttatacgctgctgttctatgccaaaacctatgcaggctatcagtcgcttgttcagctg
gcaaccctggccgcttcccgtgaaggactccctttcgtgacgctcgaagaggtcagatca
aaagcagaggatcttctgattatttccccgttttcatcaggtgaaatgcaaagcctcgca
gaagcaggtgacaaagaggctgcgtcagactttttgggtcaactgaaagcgatcgcaggt
ccgaagtccgtgtatgtggaaattcaaaatcactggcttccctgggagcggatgagaatg
cagtcgatccgtcattggctcactgcgaatcaggtacaggtcgttgcaacgaatcacgtc
catttttttgacaagagccagttcaatgcagcagggacgttacaggcgatccgggaagga
acgtccacaaaagcaatggatgacagcctgttatcacctgagatgtatttgaagagtgaa
caggagatgcaagagcaatttgccaaatggcgtcaggccctcgacgttacgaatacgatc
gccgatcagtgtgaagtggaactgccttttggcggaaagattcttccttcctatcctctc
gaacccggacaagagacctctcaggtgctccgggactggtgtgaaaagggattaacagcc
agagtgagcgatccggatgaggcttatcaagaacgattgaagaaagaactgcgtgtgatc
cgggaaatggggtacgaagattatttcctgatcgtagccgattttatgcggtttgctcat
gatcaaggcattttgaccggtccgggaagaggatctgccgcagggtcgatcgttgcttat
gtgctggggatcacggacgtggacccgttggcgtatgacctgctgttcgaacggtttctc
aatccggagcgggtttccatgccggatatcgatatcgacttttcggaccggtcacgggac
aaagtgatccactatgtacagcatcggtacgggtcttctcacgtggcacagattatcacc
ttcggaacacttgcagcaaaggctgcactgagagacacggcacgggctttggagatcccg
gtgagtgaagtggaccagctgaccaggcaggttccttcgagaccgaacatcacgctcgat
gaagcgtacgctgaatccggcagctttcgagaactgctggaggcaatgccttcgggcaga
gatttatttgatacagcaaaggccattgaaggactggcgaggcatacgtccattcatgca
gctggagtggtgatgagtgaacatccactgacggatgttgtgccgctcgagtccggccat
gacggcttatttctcacgcaatacccgatgaatgatctcgaggcgttagggctgttaaag
atggattttcttgggctgcggaacctgagctttatggaacggatcagagaactggtctat
gaaaaaaacggggaatggctcgatgtaacaaggctcccgattgaggatgatcagatgttt
gcgctgtttgctaaaggggcgaccaacggcatctttcaactggagtctcaagggatgcgc
cgggtactgaaacagcttcgcccaagccgttttgaagatatcgtagccgtgaacgccctc
taccgcccgggtccgatggaacagattccgacgtttatcgcacggaaaaatggtgaggag
ccgatcagctatccgcatgcagatcttgagacgattttgaaaccaacctacggggtcatg
atttatcaggaacagatcatgcaaattgccgccgtgatggcaggattcagccttgctgag
gcagatcttctccggcgggcggtcagtaagaaaaaaaaggaggaactggatcgctcgaga
accctgtttgtgtcgggtgctgaagggaaggggtacagcaccgctgaggcagaatcggtc
tacgatctgattgaacggtttgccaactatgggttcaatcggagtcatgcggtggcatac
agcatgatctcctgcagactcggctggctgaaaacgcatcacccggatgcgtttatggca
gctttgatggaacagaccgtccacgcaccggataaactggtcagcttcatggcagaggcc
agggacatgaatctcatggtatcaggtccttctgtgcagcatagcgggttgggtgtttcg
gttgttgaacgggcgatttatttacccctcactgtcatccgctataccggcgtgcaggcg
attgaggaaatcgtccgtgtccgcggccttgaaggacccttcacgagcctgtttgatttt
tgcaaacgggtctcgctgaaaaaagtcaatcgccgtgcgattgaatccctgattatggca
ggagcaatggatgattttggcgttgagagaacgacgctgtttgcatcccttgatgatgcg
attcaatatggtgatgaggaaggcaaaggattttcgctttttgaccaggaaggcggcgaa
ccggcctacacgaccggcggcaaaatgacgttaatgaataagctggatgaagagcaggaa
gcaatgggcttttacatgtccggtcatccggtggaggattatgaggaactgctgagaccg
tttaacaaaatgtcgattcatgaggccattgatacacacgggcagtcagggaaaacagtt
cgtgttgccggtatggtggagaaggtccgctatgtccagacgaaaaaaggcgagcagatg
gcgttcatccatatcaccgatgaaacaggcggactcgacgtcacggtgtttccgaaggtc
ttgaagaaccatcaaatgagcttgaaaaaacaggagcttgtttttctcgaaggtcaaatg
cagtggcggcaggatcagtggaatctcatcatggaaaaagccatcacgatcgatatgctg
aaaatgcgaaagaaagacaagcagcagccggtattgtatttgttcatttcgttgcttcat
gaaaaaaccggtaaaggtgaagccgttaaagaagtgctgcaggatacacctggtgatgtc
ccggtcgtgatcaaatacgaatcctccggtgaagtgaagaaattatcggaactctggaat
atcgccgctgaagacgagcttttgatgaaactcgaagggatacttggtaaaaagaatgtg
catttccgttcatcaagggtgtga
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