Salisediminibacterium beveridgei: BBEV_1800
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Entry
BBEV_1800 CDS
T05114
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev02020
Two-component system
bbev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBEV_1800 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBEV_1800 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbev03021
]
BBEV_1800 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bbev02035
]
BBEV_1800 (sigD)
Transcription machinery [BR:
bbev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBEV_1800 (sigD)
Bacterial motility proteins [BR:
bbev02035
]
Flagellar system
Flagellar assembly proteins
Stator
BBEV_1800 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Crass_capsid
SMP_2
UPF0122
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AOM83161
UniProt:
A0A1D7QVX2
LinkDB
All DBs
Position
complement(1943214..1943981)
Genome browser
AA seq
255 aa
AA seq
DB search
MSRLSFTAQLDKDWKSWTSSRDRSAGNRLIEAYMPLVDYHVQRIGIHLPKNVSHDDLRSH
GLMGLYDALEKFDLKRELKFDTYASFRVRGAIIDGLRQEDWLPRTLRDKAKKIEQVTETL
EQQLGRNVTAMEIADETGMTENEVIRTSNESYFSHRLSIDEPTQDDDQTETYASSIADQQ
SLTPAESLSKQSDYAELAEAIQTLNEKEQLVITLFYYEELTLTEIGEALSLSTSRISQIH
SKSVFKLQQQLKSGR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggttgtcattcacagctcaattagataaggattggaaatcctggacttcgtct
cgggaccgttctgcgggaaaccgtttgattgaagcgtatatgcctttggtcgattatcac
gtccaacgaatcggtattcacctccccaaaaacgtttcacatgatgatttaaggagtcac
ggactaatggggctatacgatgctttggaaaaatttgatctcaaaagagaattgaaattt
gatacctatgcttctttcagggtcagaggtgccattatagatggactgcgacaggaagac
tggctgcccagaacattgagggataaggcgaaaaagatagagcaggtaactgaaacactt
gagcagcaattggggcgaaacgttactgctatggaaattgcagatgaaacaggaatgacg
gagaatgaagtcattcgcacctcgaatgagagctatttttcacaccgtttgtccattgac
gagccaactcaggatgacgatcagaccgaaacctatgcatcatccatcgctgatcagcaa
tcattgactcctgctgaatcattaagtaagcagtcagattatgccgagttggctgaagcg
attcagacattgaatgaaaaggaacaattggtgatcacactgttttattatgaagagctc
acattaactgaaattggagaagcgctctctttgtcgacgtccagaatatcgcaaattcat
tccaaatccgtttttaaattgcagcagcaactcaaatctggcagataa
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integrated database retrieval system
