Salisediminibacterium beveridgei: BBEV_1837
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Entry
BBEV_1837 CDS
T05114
Symbol
topA-2
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbev
Salisediminibacterium beveridgei
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbev03032
]
BBEV_1837 (topA-2)
03400 DNA repair and recombination proteins [BR:
bbev03400
]
BBEV_1837 (topA-2)
Enzymes [BR:
bbev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBEV_1837 (topA-2)
DNA replication proteins [BR:
bbev03032
]
Prokaryotic type
DNA Topoisomerases
BBEV_1837 (topA-2)
DNA repair and recombination proteins [BR:
bbev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBEV_1837 (topA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
DUF3970
RTX_C
Motif
Other DBs
NCBI-ProteinID:
AOM83198
UniProt:
A0A1D7QW45
LinkDB
All DBs
Position
complement(1975189..1977258)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDYLVIVESPAKAKTIGKYLGKKYNVKASMGHVIDLPKSQMGVDVEHNYQPKYITIRGK
GPVLKELKQAAKKAKRIYLAADPDREGEAIAWHLADSLNIDKDSKCRVVFNEITKEAIKD
SFKHPGEINTNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIDREN
EITAFVPEEYWSITAHLSKDGMDFEAKFQQLDGKKKKLASKEDVDQVLERMSKGDFEVSA
ISRKERKRNPVSPFITSSLQQEAARKLNFRAKKTMMLAQQLYEGVDLGKQGTVGLITYMR
TDSTRLSETAKAEAKEYIDIHYGNEFHLEPKNAKKNEKAQDAHEAVRPTGVMRDPKAMKP
YLSRDQYRLYKLIWERMVASQMAPAVMDTMSVDLNNGGATFRATGSKMKFLGFMKVYVEG
NDEGKEEKDKILPDLTEGDKPESEKVEPNQHFTQPPPRYTEARLVRTMEELGIGRPSTYA
PTLDTIQRRGYVALEDKRFVPTELGTIVLDMIQEFFPEILNVEFTAEMETRLDAVEEGSE
EWVRIIDEFYKGFEKRLSFAEEEMKEVEIKDEPAGEDCEKCGHEMVYKMGRYGKFMACSN
FPNCRNTKAIVKEIGVGCPKCEKGQVVERKSKKRRIFYGCDQYPECDFISWDKPIARKCP
KCQEMLIEKKSKKGVQVNCSSCEYKEDRT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacctagtcatcgtggaatctcccgcaaaagcgaaaaccatagggaaatac
cttggtaaaaaatataatgtaaaagcttccatgggacatgtgattgacttacccaaaagc
caaatgggtgttgatgttgaacataactatcagcctaaatacattaccattcgtgggaag
ggaccagtactgaaagaacttaaacaggctgccaaaaaagcaaaacggatttatctggca
gctgacccggaccgtgaaggtgaagcaatcgcatggcatctggcagacagcctgaatatc
gacaaagattctaaatgccgggttgtatttaatgaaatcacaaaagaagccattaaggat
tcctttaaacatcccggagagatcaacacaaacctggtggatgctcaacaggcaaggcgc
gtactggaccgactggtcggttataacatcagtccattactatggaagaaagtgaaaaaa
ggactcagtgcaggacgggttcaatctgttgcagtgaaaatgattattgaccgggaaaat
gaaatcactgcatttgttcccgaagaatactggtcgatcacggcccatttgagtaaagat
ggtatggactttgaagcgaagtttcaacagctggacggcaaaaagaaaaagctggcttca
aaagaagatgtagaccaagtgctcgaacgcatgagtaaaggggattttgaagtatcggct
atcagtcgaaaagagcggaagcgaaacccggtttctccatttattacatcttccttgcaa
caagaagcagcaagaaagttgaatttcagagcgaaaaagaccatgatgcttgcccaacaa
ctatacgaaggtgtagacctcggtaaacagggaactgtcggtttgattacttatatgcga
acggattcaacccgtctctcagaaacagcgaaggccgaggcaaaggaatacattgatatt
cattatgggaacgaatttcacttggagcctaagaatgcgaagaaaaacgaaaaggcgcag
gatgctcacgaagcagtccgcccaaccggagtaatgcgtgatccgaaagcgatgaaacct
tatctttcgagagatcaataccgtctctataaactgatatgggaacgcatggttgcttct
caaatggcgccagccgttatggataccatgagtgtggacctgaataacggcggagccacg
ttccgtgcgacaggttcaaaaatgaaattccttggatttatgaaagtgtatgtagaaggt
aatgatgaagggaaagaagaaaaggacaaaattcttccggatttaacagaaggtgataaa
cctgaatcagaaaaggtggaaccgaatcagcacttcactcagccgcctccaagatatacg
gaagcccgcctggtaagaacaatggaggagcttggcatcggtcgtccgtccacctatgcc
ccgacgctcgataccattcagcgcagagggtatgttgcgctcgaggataaacgctttgta
cccacagaactcggaacgatcgtacttgatatgatacaggaattcttcccggaaatactg
aatgtggaattcactgcagaaatggaaacgagactggatgcagttgaagaaggcagtgaa
gaatgggttcggatcatagacgaattttataaaggttttgaaaagcgtttgagttttgca
gaagaggaaatgaaagaagtggaaatcaaagacgagcctgctggtgaggattgtgagaaa
tgcggtcatgaaatggtctataaaatggggcgttatgggaaattcatggcttgttccaat
ttccccaattgccggaatacaaaagcgatcgtcaaagaaataggtgtgggttgtcctaag
tgtgaaaaaggacaggtcgttgaacgaaagagtaaaaaaaggcgaatcttttatggctgt
gatcagtatccggaatgtgactttatttcatgggataaaccaatcgcacggaagtgtccg
aagtgtcaagagatgctgattgaaaaaaaatccaaaaaaggtgtgcaggtcaattgttcg
tcatgtgaatataaagaagaccgtacttga
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integrated database retrieval system
