Salisediminibacterium beveridgei: BBEV_1960
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Entry
BBEV_1960 CDS
T05114
Symbol
pdhD
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev00010
Glycolysis / Gluconeogenesis
bbev00020
Citrate cycle (TCA cycle)
bbev00260
Glycine, serine and threonine metabolism
bbev00280
Valine, leucine and isoleucine degradation
bbev00310
Lysine degradation
bbev00380
Tryptophan metabolism
bbev00620
Pyruvate metabolism
bbev00630
Glyoxylate and dicarboxylate metabolism
bbev00640
Propanoate metabolism
bbev00670
One carbon pool by folate
bbev00785
Lipoic acid metabolism
bbev01100
Metabolic pathways
bbev01110
Biosynthesis of secondary metabolites
bbev01120
Microbial metabolism in diverse environments
bbev01200
Carbon metabolism
bbev01210
2-Oxocarboxylic acid metabolism
bbev01240
Biosynthesis of cofactors
Module
bbev_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bbev_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bbev_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bbev_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BBEV_1960 (pdhD)
00020 Citrate cycle (TCA cycle)
BBEV_1960 (pdhD)
00620 Pyruvate metabolism
BBEV_1960 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
BBEV_1960 (pdhD)
00640 Propanoate metabolism
BBEV_1960 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBEV_1960 (pdhD)
00280 Valine, leucine and isoleucine degradation
BBEV_1960 (pdhD)
00310 Lysine degradation
BBEV_1960 (pdhD)
00380 Tryptophan metabolism
BBEV_1960 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BBEV_1960 (pdhD)
00670 One carbon pool by folate
BBEV_1960 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbev04147
]
BBEV_1960 (pdhD)
Enzymes [BR:
bbev01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BBEV_1960 (pdhD)
Exosome [BR:
bbev04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BBEV_1960 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_2
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
UDPG_MGDP_dh_N
FAD_binding_3
DAO
Trp_halogenase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AOM83321
UniProt:
A0A1D7QWD7
LinkDB
All DBs
Position
complement(2096056..2097465)
Genome browser
AA seq
469 aa
AA seq
DB search
MVVGDFPIEVDTLVIGSGPGGYVAAIRAAQLGQKVTIVEKEQMGGVCLNVGCIPSKALIE
AGHRYHDAGNSDDMGISVEKVNLDFSKVQQWKQSVVEKLTGGVEGLLKGNEVDIVKGEAY
FVDDTTVKIMDEKSSQTYKFENCIVATGSSPIELPKFKWSDKVMSSTGALGLKEVPDKMV
VIGGGYIGIELGSAYANLGSEVTILEGMKQILPGFEKQMSQLVSKRLKNMGVEIKTEAFA
QEMEETDSGVKITAEVKGKEETFEGNVLLVTVGRRPNTDELGLEQAGVELTEKGLVKIDK
QCRTSVSNIYAIGDIVEGPALAHKASYEAKVAADAISGEKTEIDYTAIPEVVFSGPELAQ
VGLTEQAAKDEGYDVIASKFPFQANGRALSLNSSEGFMKMVTRKEDGLVLGVQIAGHNAS
DMISEACVAIEAGMTAEDLSLTIHAHPSLGEITMETAELALGMPIHVTK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagattttccaattgaagtggatacactggtcatcggatcaggtcctgga
ggttatgtggcagccattcgcgccgcacagcttggacagaaagtgacaattgttgagaaa
gagcaaatgggtggtgtgtgcttgaatgttgggtgcattccatccaaggccctcatcgaa
gcaggacatcgttatcatgatgccggtaattctgatgatatgggcatttcagtagagaaa
gtcaacctggacttctctaaagttcagcagtggaagcagtccgttgtcgaaaaattaact
ggcggtgtggaaggacttctcaaaggcaatgaagtagatatcgtgaaaggcgaagcctat
tttgttgatgatacaaccgtcaagattatggatgaaaaatcttctcagacgtacaagttt
gaaaattgcatcgtcgcaactggatcctcacccattgaattgccgaaatttaaatggagt
gataaagtcatgtcttccacaggagctcttggtctgaaagaagtaccggataaaatggtg
gtaatcggtggaggatacattggtattgaactcggttcggcctatgccaatctcggctct
gaagtgacaattcttgaagggatgaaacagatcctccctgggtttgaaaagcagatgagc
cagcttgtttccaagcggttgaagaacatgggtgtcgagatcaagacggaagcttttgca
caggaaatggaagaaactgattcgggtgttaaaatcaccgccgaagtcaaaggaaaagaa
gaaacctttgaagggaatgtcctgcttgttacggtcggacgtcgcccgaacacggatgag
cttgggctcgagcaggccggcgttgaattgacagaaaaaggacttgtcaagatcgacaaa
cagtgccggacgtccgtctctaacatctatgctattggagatattgttgaggggcctgct
ttggctcacaaagcatcctacgaagcaaaagtggcagctgatgcaatatccggtgaaaag
acggagattgattatacagccattcctgaagttgttttctctggtcctgaactggcacaa
gttggtctgactgaacaggcagcaaaagatgagggatatgatgtcattgcctccaaattc
cctttccaagcgaatggtcgggcgctgtcattgaatagctctgaaggatttatgaagatg
gtcacccgcaaagaagacgggctcgtgctcggagttcaaatagcaggacataatgcatct
gacatgatctcagaagcgtgtgttgctattgaggcgggtatgactgctgaagatctgtcg
ttgaccatccacgcccatccatcattgggtgaaatcacgatggagactgcggaattggct
ctcggtatgcctattcatgtaacgaaataa
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