Salisediminibacterium beveridgei: BBEV_2453
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Entry
BBEV_2453 CDS
T05114
Symbol
helD
Name
(GenBank) ATP-dependent DNA helicase rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev03420
Nucleotide excision repair
bbev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBEV_2453 (helD)
03430 Mismatch repair
BBEV_2453 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbev03400
]
BBEV_2453 (helD)
Enzymes [BR:
bbev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBEV_2453 (helD)
DNA repair and recombination proteins [BR:
bbev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBEV_2453 (helD)
MMR (mismatch excision repair)
Other MMR factors
BBEV_2453 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
UvrD_C
AAA_19
UvrD_C_2
DEAD
SLFN-g3_helicase
zf-C2H2_aberr
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AOM83793
UniProt:
A0A1D7QXQ5
LinkDB
All DBs
Position
complement(2618847..2621135)
Genome browser
AA seq
762 aa
AA seq
DB search
MKADKHPAKEEEQKRLEYTTEYIEEVLEAARQSKIDYKSKIKQALIDLDHLDSSNSYVNI
LANANMLDTTGKNLRMLESLKDEPYFARMDFVPEGKIEKEKLYIGKTSLTEQDSQEPVIL
DWRSPIANIYYEGQLGEVTYEAHGKTFHGELELKRQFVIEEKSLQEIRDIDLTARDQLLQ
ESLTTSADNRLKDIVSTIQAEQNQIIRADMNRPLFVQGVAGSGKTTIALHRMAYFIYSYA
DDFDPSQLMILAPNRLFLDYISDVLPELGVDLVTQTTFTDYTKHIIGDRFTFRSKDERIA
AIIDPEQFTGDIEWIAGFKGSKNMKVILDSYLEGIIDSWLPDQDITLDRYTLFTAEEIRK
LYEDEYTYIAPYQRLMKIREVIKATVKRRSKELLDKVEELYDDKIDALRSRVKDEEERRQ
RVVKLWDKREAHLDAMRKEAKTILPQLTKQMPKTKTEALTRKLLTDKDTLIHIASEYLSE
SEVETFTRHHRTTFRKKELDLEDAAIFLYIESRLFGIHKEHQYQNVFIDEAQDYSYLEFV
VLKQVCNTSLFTILGDLSQGIHSYRGITSWQNVMEDVFVNASFQTLRQSYRTTIEIMQEA
NRVIQKSSYEGMVLAEPVVRHDEQPDIHQFTAMNEAAAAIYKHYREIRGDVYHSFAIVTK
TEREAERVYQEVSLASGEMSVSLLDENQEHDGTDIVILPSYLSKGLEFDVVTILTDQDAF
TDQDIDIKLLYVAMTRALHRLSIWYNQKHEGLIEDVLNHKQI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggacaaacatccggcaaaagaagaggaacaaaaacgtcttgaatacacgacg
gaatacattgaagaagttcttgaagcagcaagacaaagcaaaattgattataaaagcaag
atcaagcaggcactgatcgaccttgatcacctggacagttcaaacagttatgtcaatatc
ctcgcgaatgcaaatatgctggatacgacggggaagaatttacggatgctcgagagcctg
aaggatgaaccgtattttgcgcgaatggattttgtgcccgagggaaagatagagaaggaa
aaattatatatcggaaaaacatcgctcacagaacaagacagccaggaacctgtcattctg
gattggcggtcacctattgccaatatttattatgaaggccagcttggcgaagtcacatat
gaggcacacggaaaaacgtttcatggggagctggaactcaagcgccagtttgtcattgaa
gaaaagtcgttgcaggaaattcgcgacatcgatctgacggccagagatcagctccttcag
gaatcgttaaccacaagtgccgataaccggctgaaggatatcgtgtctacaattcaagcc
gaacaaaaccagatcatccgtgcggatatgaaccgtccgctctttgttcagggggtggca
ggaagcggcaagaccacgattgccctgcacagaatggcgtattttatatacagttatgca
gacgatttcgatccatcccaattaatgattttagctcctaaccgactgtttcttgactac
atttccgatgtccttccggaactgggagttgacctcgttacgcagaccacttttactgat
tatacgaagcacattatcggcgatcgttttacgtttcgatcgaaggatgaacgcatcgca
gcgatcatagatccggaacaattcacaggagacatagaatggattgcaggattcaaaggg
tcaaaaaacatgaaggtgattctcgacagttatcttgaagggattatcgacagctggctt
cctgatcaggacattaccctggaccggtatacattgtttaccgcagaagaaatccgtaaa
ttgtacgaagacgaatatacctatatcgcgccttatcagagactgatgaaaatcagggaa
gtcatcaaagcaaccgtgaaacgaagatccaaagaacttctggataaggtggaagaactc
tatgatgataagattgatgcactcagaagccgtgtgaaagacgaagaggaacggcggcaa
cgggtcgtgaagctgtgggataaacgggaagctcatcttgatgctatgagaaaagaagca
aaaacgattttaccccagttgacaaaacaaatgccgaaaacgaaaacagaggccctgaca
agaaaactgctaacagataaagatacattgattcacatcgcatcggaatacctgtcagaa
tcggaagttgagaccttcaccagacatcaccgcacaacatttcgaaaaaaggaattggat
cttgaagatgcggcaatatttctgtatatagaatcccggctgttcggtattcacaaggaa
catcagtaccagaatgtgttcatcgatgaagcacaagattacagttatttggaatttgtc
gttttgaaacaggtttgcaatacgagtctgtttaccattttaggtgatttatctcaaggc
attcacagctaccgggggataacaagttggcaaaacgtcatggaggatgtctttgtgaat
gctagctttcaaacgctcagacagagttaccggacgacgattgagatcatgcaagaggca
aaccgggtcattcagaagagctcatatgaaggaatggtgcttgcagaacccgttgtccgt
catgacgagcaaccggacatacaccaatttacggcgatgaatgaagcggcagctgccata
tacaagcactatcgtgagatcaggggtgatgtttaccactcctttgcaatcgtaacgaaa
acggaacgtgaagcagagcgggtgtatcaagaggtatcccttgcatcaggtgagatgagt
gtttcacttctcgatgaaaaccaggaacatgatggaacagacatcgtcattttgccatca
tatctgtcgaaagggctggaatttgatgtggtcaccatcctgaccgatcaagatgctttt
acagatcaagatattgatatcaagcttttgtacgttgcgatgacaagagccctgcacagg
ctgtcaatctggtataatcagaaacatgaaggactgattgaagacgtactgaatcataaa
caaatctga
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