Salisediminibacterium beveridgei: BBEV_3219
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Entry
BBEV_3219 CDS
T05114
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBEV_3219 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbev03021
]
BBEV_3219 (rpoA)
03400 DNA repair and recombination proteins [BR:
bbev03400
]
BBEV_3219 (rpoA)
Enzymes [BR:
bbev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBEV_3219 (rpoA)
Transcription machinery [BR:
bbev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBEV_3219 (rpoA)
DNA repair and recombination proteins [BR:
bbev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBEV_3219 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
SpoIVA_ATPase
HHH_5
MukB
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AOM84534
UniProt:
A0A1D7QZU0
LinkDB
All DBs
Position
complement(3431835..3432779)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIEAVELSEDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGSAVTSVQFNN
VLHEFSTIEGVVEDVTTIILNLKKLSMKVFSEEEKTLEIDAQGEGVVTARDLTHDSDVEV
LNPDLHIATLSKGAQFQMKVTAKRGRGYVPAEGNNSDDLPIGVIPVDSIFTPVSRVNYQV
ENTRVGQVANFDKLTLDVWTDGSIRPEEATSLGAKILNEHLNIFVGLTDQAQHTEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKSEEDMMKVRNLGRKSLEEVQ
EKLHELSLGLRKEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaagccgaagatagaagcagttgaactgagtgaagatggcacgtac
ggcaagtttgtcgttgaaccgcttgagcgcggttatggcacaacgttggggaactccctg
cgtcgtattcttttgtcatcattgccaggatcagctgtgacaagtgtgcagttcaacaat
gttcttcatgagttctcaaccattgaaggtgtcgtggaagacgtgactacgatcattctg
aatctgaagaagctttcaatgaaggtcttctcagaagaagagaagaccctggaaatcgat
gcgcaaggtgaaggagtcgtaacggctcgcgacctgacgcatgacagtgacgtggaggtt
ctgaaccccgaccttcatattgccactctctcaaaaggcgctcagtttcaaatgaaagtg
actgctaaacgaggccgtggctatgttccggcagaaggaaataactctgatgatttgcca
atcggcgtcatccctgtcgactcgattttcacaccggtttcccgtgtgaattaccaggta
gagaatacacgtgttggccaggtggccaactttgataaactgactctggatgtttggacg
gacgggagcatccgcccggaagaagcgacttctctcggagcgaaaatcctgaatgaacat
ctgaacatttttgtcggcctgacggatcaggcccagcacacagaaatcatggtggaaaag
gaagaagatcagaaagagaaagtgcttgagatgaccatcgaagagctcgacctttccgtt
cgttcctacaactgcctgaagcgtgccgggatcaataccgttcaggaactgacacagaaa
tcagaagaggacatgatgaaagttcgtaacctcggacgaaagtccctggaagaagtgcag
gaaaagctgcatgaactgagtctgggtcttcgtaaggaagaatag
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