Bifidobacterium bifidum BGN4: BBB_0007
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Entry
BBB_0007 CDS
T02135
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_0007 (gyrA)
Enzymes [BR:
bbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBB_0007 (gyrA)
DNA replication proteins [BR:
bbf03032
]
Prokaryotic type
DNA Topoisomerases
BBB_0007 (gyrA)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBB_0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAMB1
FUSC
Motif
Other DBs
NCBI-ProteinID:
AFL03604
UniProt:
I3WFE1
LinkDB
All DBs
Position
7736..10468
Genome browser
AA seq
910 aa
AA seq
DB search
MADENSNGTDLPEQNDERAEHSMEPISPQANEQLVLDDNRVAHTDIQKEMRQSYLDYAIS
VIVERALPDVRDGMKPVHRRIVYAMYDGGYRPDRGYSKCARPVADVMGNYHPHGDAAIYD
SLVRMAQPWSMRYTLVDGQGNFGSAGDDPPAAMRYTECRMMPLAMEMVRDIDKDTVDFVP
NYDGRTQEPTVLPARFPNLLANGSSGIAVGMATNIPPHNMRELAEGVHWTLDHPEASREE
LLNALIGIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVVTELP
YQVNPDRLAASIREGVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLEVIERRTRYLKREAEERDHILQGLL
KAMDAIDEVIRLIRSSQGREDARPKLMEFLDIDQVQADAILSMQLVRLANMERQKIIDEH
EELMRKIADYNDILAKPERQRTIVGDELDEIVAKYGDERRTKILPYSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKANEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRTGKVKKT
ALAEYDSPRQGGLIAVRLAADEETGEPTDELIGAALCNAADDIILVSKQGMSLKFVADND
QLRPMGRQTAGVQGMKFRGDDELLAMDVVPEDSKQDLLVVTNEGFAKRTAISEYRLQGRN
GFGVKAVQLAEGRGSLVGALIVSEDDQVMAIMKSGKVIRSNVTEVKRTGRTTQGVTLAKP
DKGDEIISIARNEETGEDEVETTDDTAAAASATTSPDTAENTPDTADSVASGSDSGAASD
ENVNNTDDEA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaaacagcaacggcaccgacctgccggagcagaacgacgagcgtgccgaa
cactcgatggagcccatcagccctcaggccaacgaacagttggtcctcgacgacaatcgc
gtggcccacaccgacatccagaaggagatgcgtcagtcgtacctcgactatgccatctcc
gtcatcgtcgaacgagcccttccggatgtgcgcgacggcatgaagccggtgcaccgccgc
atcgtgtacgcgatgtatgacggcggctaccgtcctgatcgcggctattccaagtgcgcc
cgacccgtcgccgacgtgatgggcaactaccacccacacggcgacgccgcgatctacgat
tcgctggtgcgcatggcccagccatggtcgatgcgatacacgctggtcgacgggcagggc
aacttcggctcggccggtgacgacccgcccgcagccatgcgttacaccgagtgccgcatg
atgccgcttgcgatggaaatggtgcgagacatcgacaaggacaccgtcgacttcgtgccc
aactacgatggccgtacgcaggaacccaccgtattgcccgcgcgcttcccgaacctgctg
gccaacggctcgtccggtatcgccgtcggcatggcgaccaacattccgccgcacaacatg
cgcgagctggcggaaggcgtgcattggacgctcgatcatcccgaagcgagccgtgaagag
ctgctgaacgcactcatcggcatcatcaagggaccggacttcccgaccggcgccacgatc
ctcggccacaagggcatcgagcaggcgtaccgcaccggccgcggcctgattacgatgcgc
gcggtggtcaacaccgaggagatcaagggccgtatgtgcctggtggtcaccgagctgccg
tatcaggtgaatcccgaccgtctggccgcttccatccgagaaggcgtgcgcgacggcaag
atccagggcatcgccgacatgcgcgacgagacgtcgggccgtaccggccagcgactcgtg
ctcgtgctcaagcgcgatgccgtgccgaaggttgtgctcaacaacctgtacaagcactcc
cagctgcagcaaacgttcggcgcgaacatgctcgcgctggtcgacggcgtgccgcgcacg
ctgagcctcgacgccttcatccgccattgggtgaaccaccagctcgaagtcatcgaacgc
cgtacccgttacctcaagcgcgaggccgaggaacgcgaccacatcctgcagggcctgctc
aaggccatggacgccatcgacgaggtcatccgcctcatccgctccagccagggccgcgag
gacgcccggccgaagctgatggagttccttgacatcgatcaggtgcaggccgacgccatc
ctttccatgcagctggttcgactggccaacatggaacgccagaagatcatcgacgagcat
gaggaactcatgcgcaagattgccgactacaacgacatcctcgccaagccggaacgccag
cgtacgatcgtcggcgacgagctcgacgagatcgtcgcgaaatacggtgacgaacgtcgc
acgaagatcctcccctactcgggcgagatgaacgtcgaagacctgatcgccgaggagaac
gtggtggtcaccgtcacgcactccggcttcatcaagcgcaccaaggccaacgaataccgc
gcacagcatcgcggcggcaagggcatcaagggcgccaagctgcgtgaggatgacgtggtg
gatcacttcttcctcacgtccacgcataactggctgctgttcttcaccaacaagggccgc
gtctaccgcatcaaggcgtacgagctgcccgaaggctcgcgcgattccaagggccagcac
gtggcgaacctgctgcagttcggtcccgacgagacgattcagaccgtgctgtcgattccg
aactacgaggtcgccaagtatctggtgcttgccacccgcaccggcaaggtcaagaagacc
gcgctggccgagtacgattcgccgcgtcagggcggactcatcgcggttcgtctcgcggcc
gacgaggagaccggcgagcccacggacgagctgatcggcgccgcgctgtgcaacgccgca
gacgacatcatcctcgtctccaagcagggcatgagcctcaagttcgtggcggacaacgac
cagctgcgtccgatgggacgccagaccgccggcgtgcagggcatgaagttccgcggggat
gacgaactgctcgccatggatgtggttccggaggactccaagcaggacctgctcgtggtc
accaatgagggcttcgccaagcgcaccgcgatcagcgaataccgactgcaggggcgtaac
ggcttcggcgtcaaggcggtacagctcgccgaaggtcgcggatcgctggtcggtgccctg
atcgtaagcgaagacgatcaggtcatggcgatcatgaagtccggcaaagtgatccgttcc
aacgtcaccgaagtcaagcgcaccggccgcaccacgcagggcgtgacgctcgctaagccc
gacaagggcgacgagattatctccatcgcccgcaacgaggaaaccggcgaagacgaagtc
gagacgacggatgatacggctgcggccgcatccgcgaccacgtctcccgatacggccgaa
aacactccggataccgcggatagcgtcgcatccggcagtgattcgggcgcggcatctgac
gagaatgtgaacaacactgatgacgaggcataa
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