Bifidobacterium bifidum BGN4: BBB_0194
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Entry
BBB_0194 CDS
T02135
Name
(GenBank) putative ATP-dependent helicase
Organism
bbf
Bifidobacterium bifidum BGN4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFL03790
UniProt:
I3WFX7
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All DBs
Position
238075..241974
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AA seq
1299 aa
AA seq
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MADDTAGAAPLPPSVDDAELRRLGGNAVYFRAKDVLKSGRMHGMTVSFNVPDSPRTSGTM
LTGARANVRLTALVKGADRYADDYRVSAAIDTDAGKVGQSSCTCPAYGRFRGVCKHVIAL
VMAYNEHPDDFAAADDGNGSTNGIGRGAAGLVPRQPAVRTTRALDLFMRQQDDERTRRSQ
SRQLDLLKEIGGLADSGGVAGAAQTARFMPIASVSLRLSLSFSLNSCVAKFRIEVPSRGI
SYVVKDIASLLQSVKNREFVAYGKKLAFVHSRDAFDERSRNLLDVLSRAQDIRAVINNDN
SAYSYYYRRQSDDATLTLSDGEVAELLDTYVGTEDTVEYTAPARFYAPTMRVSVVDGNPD
LGLAVERGDDPEASNGSTAAAGYVIRHAQRVERFIEGQRSHYVIARPFSQAESGAGVGSG
GRALLSVDRATIYRCDADFAQKRALLSLLCGENDREVMYLSESDVDRFVRTVLPQLVSHQ
ENEAGRSVDAIGASAGPNAEDGSAASSVFDRLVPPAGRETGVPAHGGLIIDVPPELLAKM
RVPCRLAFYLDRDRAGVTCDAQAHYGDKHYHVFDGVGVDASMRDKEMERLAVEAMLHYFP
RPSGAVAAIPESDDEAIYRLLTEGLAVLRGLGDVMATPAFDGLTAMPRPTISIGLSVKSG
LVEISPIADEIDPDDVPGLLASYLRRRRFHRLRNGSFVDMRNVDMSDVDEIADDLGLRAA
DLESGSITVPAYEAYYLDHQVDDDAKDASFTAYLDGLRVIDPSTYRVPAALASVLRPYQV
EGFRWLNAVCDKGFGGILADEMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNW
VAEVAKHTPELRVEAIAGTKPERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPD
VLVTSYDLLRRDIDDYAGLEFYCMTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIE
NRLSELWSIFDFLMPGMLGSYAHFRERFEMPVLSGDETAQKKLQSFVGPFILRRLKSQVL
KDLPDKIENVITVQLQGEQRKLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVC
CDPRLIYENADGHASALSAGVQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSC
RDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLI
SLKAGNTGLNLTGACVVVHADPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERI
LNLQRSKTDLAQRFVDSASSATGRSMAALTKDDLLALLG
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacactgccggtgccgcgccgctgccgccctccgtcgacgacgccgaactg
cgccggctcggcggcaacgctgtgtattttcgagcgaaggacgtgctgaaatccgggcgt
atgcacggcatgaccgtatcgttcaacgtgccggattcgccacgtacctcgggcaccatg
ctgacgggcgcgcgggccaacgtacgcctgacagcgctggtcaaaggcgccgaccggtac
gcggacgattaccgcgtctccgccgcgatcgacaccgacgcgggcaaggtcggccagtca
tcgtgcacatgccccgcatacggccggttccggggcgtgtgcaagcatgtcatcgcgctg
gtcatggcgtacaacgaacatccggatgacttcgccgcggccgacgacggtaacggctcc
acgaacggtatcggtcgcggagccgcaggcttggttccccggcaacctgccgtgcgcacg
acccgcgcgcttgacctgttcatgcggcagcaggacgacgagcgcacccgcagatcgcag
agccggcagctcgacctgttgaaggaaatcggcggactggctgattccggaggtgtcgcc
ggcgcagcccagacggcgcggttcatgcccatcgccagcgtgtcgctgcggctctccttg
agtttctcgctgaacagctgcgtggcgaaattccgcatcgaagtgccgtcgcgcggcatc
tcctatgtggtcaaggacatcgcctcgctgctgcaatccgtgaaaaaccgcgagttcgtc
gcatacggcaagaagctcgcgttcgtgcactcgcgcgacgcctttgacgagcgctcgcgg
aacctgctcgacgtgctctcccgcgcgcaggacatccgcgccgtcatcaacaacgacaac
agcgcatactcctactattaccggcgtcagtcggatgacgcgacgctgacgttgtcggac
ggtgaggtcgccgaactgctcgatacgtacgtcggcaccgaagacacggtggaatacacg
gctccggcacggttctacgcgccgacgatgcgcgtatcagtcgtggacggcaatcccgat
ctcggccttgcggtggaacgcggcgacgatcccgaggcctcgaacggcagtacggcggcg
gccggttacgtgatacggcatgcacagcgcgtggaacgattcattgaaggacagcgctcg
cattacgtgatcgcgcggccgttttcccaagccgaatcgggcgcgggcgtggggtcgggc
ggtcgggcgctgctgagcgtcgatcgtgcgacgatataccggtgcgatgccgattttgcg
cagaaacgggcactgctgagcctgctgtgcggtgaaaacgatcgcgaggtgatgtatctg
agcgaaagtgatgtggatcgtttcgtgcgcacggtactgccgcaactggtctcccaccag
gagaacgaggccgggcggtcggtcgacgccattggcgcatccgccggtccgaacgcggag
gacggttccgccgcgtcatcggtctttgaccggctcgtgccgccagctgggcgtgaaacc
ggagttccggcgcacggcggcttgatcatcgacgtgccgcccgagctgctggcgaaaatg
cgcgtgccctgcaggctcgcgttttacctcgaccgcgaccgcgccggggtgacgtgcgac
gcgcaggctcattatggcgacaagcattaccacgtgttcgacggcgtcggcgtcgacgcg
tccatgcgcgacaaggagatggagcgactcgcagtcgaggcgatgctccactatttcccg
cgcccgtccggtgccgtggccgccatccccgagtccgacgacgaggcgatataccgtctg
ctgaccgaaggattggcggtgttgcgcggtttgggcgacgtgatggcgacgcccgcgttc
gacggcctgaccgccatgccgcgcccgacgatctccataggcctttcggtgaaatccggg
ctcgtggagatatcgccgatcgccgacgaaatcgacccggacgacgtgccgggcctgctg
gcgagctaccttcggcgccgcagattccaccggctgcgcaacggctccttcgtcgacatg
cgcaacgtggatatgtccgacgtcgacgagatcgcggatgacctgggactgcgggccgcc
gatctggaatccggctcgatcacggtgcccgcctatgaggcgtactatctggaccatcag
gtcgacgacgacgcgaaggacgcaagcttcaccgcatacctggacggcctgcgcgtgatc
gatccgtccacgtaccgcgttcccgctgcgctggcctccgtgctgaggccgtatcaggtc
gaggggttccgctggctcaatgccgtgtgcgacaagggattcgggggtatcctcgccgac
gagatgggtttgggcaagagcgtgcagctgctgtcgctgctgcttgcgcggcataaggag
tcccgggccgagcaccgtccgaatctgatcgtctgcccggcctcgctggtgtacaactgg
gtagccgaggtggcgaagcacactcccgagctgcgcgtggaggccatcgccggcaccaaa
ccggaacgtcgcgcgatgcttgacggcgtgcgcgccgcacagcaggacaccggtgtgtct
ccgacgcgggaatccgcaaggccggcatcggccgcggccgcgtccgacgacgttcccgac
gtgctcgtcacctcgtatgacctgctgcggcgcgacatcgacgactatgcgggacttgag
ttctactgcatgacgctcgacgaggcacagtacatcaagaacgccgctaccaaggtgtcg
aaagccgtgcgctccgtcaccgcagtgcatcgtttcgccctgaccggcactccgatcgag
aatcggctgagcgagctgtggagcatcttcgatttcctgatgcccggcatgctcggctcg
tacgcgcatttccgcgaacggttcgagatgccggtgctgagcggcgacgagaccgcacag
aagaaactgcaatcgttcgtggggccgttcattctgcgccgtcttaagtcgcaggtgctc
aaggatctgcccgacaagatcgagaacgtcatcacagtgcagctgcagggggagcagcgc
aagctgtatgcggcactggagcagcagctgcgctcggtcatcctgagacagcgtccggcc
gatttcaacaccggcaaaatccagattctggcgcagctgacccgactgcggcaagtatgc
tgcgacccgcggctgatatacgagaacgccgacgggcatgccagtgccttgagcgcaggg
gtgcaatccgccgcgaaagacccacagcagtccgtgaaacagcctgtgaaacagtcgaag
gcgcgcaagaccgtaagctccgcgaaactggacgccatcatcgaactggtggactcctgc
cgtgatgccggccgcaagatgctgatcttctcgcagttcaccagctacctcgacctgatc
gcgcaacggttgcgggccgacggcgtggaatacgacatgatcaccggagcgacgccgaag
aaacgccgtctggagctggtggaccggttcaacgccgacgcgacgccggtgttcctgatc
tcgctcaaggcgggaaacacgggcctgaacctgaccggcgcatgcgtggtcgtgcacgcc
gatccgtggtggaacgcggccgcgcaggatcaggccaccgatcgcgcccaccgcataggc
cagacacaggacgtcaacgtgtatcagatcgtggcgaaggacacgatcgaggagcgcatc
ctcaacctccagcgcagcaagacagacctcgcgcaacggttcgtggattccgcgtcctcc
gccaccggacggtcgatggccgcgctcaccaaggacgacctgctcgccctgctgggctga
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