Bifidobacterium bifidum BGN4: BBB_0220
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Entry
BBB_0220 CDS
T02135
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00300
Lysine biosynthesis
bbf00470
D-Amino acid metabolism
bbf01100
Metabolic pathways
bbf01110
Biosynthesis of secondary metabolites
bbf01120
Microbial metabolism in diverse environments
bbf01230
Biosynthesis of amino acids
Module
bbf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBB_0220 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBB_0220 (lysA)
Enzymes [BR:
bbf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBB_0220 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFL03816
UniProt:
I3WG03
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All DBs
Position
268233..269861
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AA seq
542 aa
AA seq
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MTGSAVRVDGTQGITPIWPVATAVNAEGALTFHGRTAESLLDEFGSPLYLIDTDEVSARA
RYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIALAAGVPGR
RLVLHGNNKSDAEIELAIEQGFAKIVVDEPGEPARIAAIARRLGKRARVMLRVTAGIHAG
GHEYISTAHEDQKFGVPLLPAGADAAALSVLDELTADPAGVTPAVTNAHIAERDGDAGDG
NAKPERELHYDVKYPYDLSHEEIPEKDKALAAAMETVADGPALAVLKDILTRSDELELVG
IHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDVR
VELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIKPVHLSDAKDKTGN
PIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDESMLVRVVGMHCESGDIIVHED
RLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAASEAGAHVMIRRQTIGDLLDLD
QG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgactggatctgctgtgcgtgtggacggaacgcaaggtatcacccccatctggccggtg
gcgacggcagtgaatgccgaaggcgccctgacgttccacgggcgcaccgccgagtcgctg
cttgacgagttcggatccccgctgtatctgatcgacactgacgaagtttccgcccgcgcc
agatatttcgtgcgcgcggcggccgacgccttcaccaactccaccacgcacgtgagtttc
gccggtaaggcattcctctccaaagaagtcgtgcggttggtgaccgatgcaggcatgctc
gtcgacacatgctctatgggggagatgcgcatcgcgctcgccgcaggcgtccccggccgt
cgtctggtgctgcacggcaacaacaagtccgacgcggaaatcgaactcgccatcgagcag
ggctttgcgaaaatcgtcgtggacgagccgggtgagccggcccgcatcgccgccatcgcg
cgacgactcggcaagcgtgcccgcgtgatgctgcgcgtgaccgccggcattcacgccggt
ggccacgaatacatctccaccgcgcatgaggatcagaagttcggcgtgccgctgctgccg
gccggcgccgatgccgcggcactcagcgtactggacgaactcacggctgatccagcaggc
gtgacgccggctgttacgaacgcgcacatcgccgaacgcgatggtgatgccggtgacggg
aacgcgaagcccgagcgcgaactgcactacgacgtgaagtacccgtacgacctgagccac
gaggagatccccgaaaaggacaaggcgctcgccgccgcgatggaaaccgtggcggatggg
ccggcactggccgtgctcaaggacatcctcacacggtccgacgagttggaactcgtcggc
attcactctcatatcggttccaacatccatgacgcagacgccttcatccaggccgccaag
cgcatgatgctgctgcgcaagaccttctacgccaccgacgcctatacgctgcccgaggtc
gacttgggcggcggctactccgtggcatacaccgacggcgaggattcgatggacgtgcgc
gtcgagctgcgtcgtctcgccgaagcggtcggtgccatcaaccgtgcgctcggtgtgccc
gcgccggccatcagcttcgagccaggacgatggatcgtcgccccggccggcgtgaccctg
tatcgtgtgggcacgatcaagccggtgcatctgtccgatgccaaggacaagaccggcaat
cccatcgatgagcgcgtgtacgtgtcggtggacggcggcatgagcgacaatattcgtcca
gcgctgtacggcgccgactacacggtccggctggccaaccgtcgcgggtcggacgagtcg
atgctggtgcgcgtagtcggcatgcattgcgagtccggcgacatcatcgtgcacgaggac
aggcttccggccgacctcaggcgcggcgacatcctcgccgtgccggtgacgggcgcatac
ggccgcacgatggcgagcaactacaatcaggcgctgattcctgccgtggtcgccgcgagt
gaagccggcgcacatgtgatgatccgtcgccagaccattggcgacctgctggatctggat
cagggctga
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