KEGG   Bifidobacterium bifidum BGN4: BBB_0220
Entry
BBB_0220          CDS       T02135                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bbf  Bifidobacterium bifidum BGN4
Pathway
bbf00300  Lysine biosynthesis
bbf00470  D-Amino acid metabolism
bbf01100  Metabolic pathways
bbf01110  Biosynthesis of secondary metabolites
bbf01120  Microbial metabolism in diverse environments
bbf01230  Biosynthesis of amino acids
Module
bbf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bbf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BBB_0220 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BBB_0220 (lysA)
Enzymes [BR:bbf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BBB_0220 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AFL03816
UniProt: I3WG03
LinkDB
Position
268233..269861
AA seq 542 aa
MTGSAVRVDGTQGITPIWPVATAVNAEGALTFHGRTAESLLDEFGSPLYLIDTDEVSARA
RYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIALAAGVPGR
RLVLHGNNKSDAEIELAIEQGFAKIVVDEPGEPARIAAIARRLGKRARVMLRVTAGIHAG
GHEYISTAHEDQKFGVPLLPAGADAAALSVLDELTADPAGVTPAVTNAHIAERDGDAGDG
NAKPERELHYDVKYPYDLSHEEIPEKDKALAAAMETVADGPALAVLKDILTRSDELELVG
IHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDVR
VELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIKPVHLSDAKDKTGN
PIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDESMLVRVVGMHCESGDIIVHED
RLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAASEAGAHVMIRRQTIGDLLDLD
QG
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgactggatctgctgtgcgtgtggacggaacgcaaggtatcacccccatctggccggtg
gcgacggcagtgaatgccgaaggcgccctgacgttccacgggcgcaccgccgagtcgctg
cttgacgagttcggatccccgctgtatctgatcgacactgacgaagtttccgcccgcgcc
agatatttcgtgcgcgcggcggccgacgccttcaccaactccaccacgcacgtgagtttc
gccggtaaggcattcctctccaaagaagtcgtgcggttggtgaccgatgcaggcatgctc
gtcgacacatgctctatgggggagatgcgcatcgcgctcgccgcaggcgtccccggccgt
cgtctggtgctgcacggcaacaacaagtccgacgcggaaatcgaactcgccatcgagcag
ggctttgcgaaaatcgtcgtggacgagccgggtgagccggcccgcatcgccgccatcgcg
cgacgactcggcaagcgtgcccgcgtgatgctgcgcgtgaccgccggcattcacgccggt
ggccacgaatacatctccaccgcgcatgaggatcagaagttcggcgtgccgctgctgccg
gccggcgccgatgccgcggcactcagcgtactggacgaactcacggctgatccagcaggc
gtgacgccggctgttacgaacgcgcacatcgccgaacgcgatggtgatgccggtgacggg
aacgcgaagcccgagcgcgaactgcactacgacgtgaagtacccgtacgacctgagccac
gaggagatccccgaaaaggacaaggcgctcgccgccgcgatggaaaccgtggcggatggg
ccggcactggccgtgctcaaggacatcctcacacggtccgacgagttggaactcgtcggc
attcactctcatatcggttccaacatccatgacgcagacgccttcatccaggccgccaag
cgcatgatgctgctgcgcaagaccttctacgccaccgacgcctatacgctgcccgaggtc
gacttgggcggcggctactccgtggcatacaccgacggcgaggattcgatggacgtgcgc
gtcgagctgcgtcgtctcgccgaagcggtcggtgccatcaaccgtgcgctcggtgtgccc
gcgccggccatcagcttcgagccaggacgatggatcgtcgccccggccggcgtgaccctg
tatcgtgtgggcacgatcaagccggtgcatctgtccgatgccaaggacaagaccggcaat
cccatcgatgagcgcgtgtacgtgtcggtggacggcggcatgagcgacaatattcgtcca
gcgctgtacggcgccgactacacggtccggctggccaaccgtcgcgggtcggacgagtcg
atgctggtgcgcgtagtcggcatgcattgcgagtccggcgacatcatcgtgcacgaggac
aggcttccggccgacctcaggcgcggcgacatcctcgccgtgccggtgacgggcgcatac
ggccgcacgatggcgagcaactacaatcaggcgctgattcctgccgtggtcgccgcgagt
gaagccggcgcacatgtgatgatccgtcgccagaccattggcgacctgctggatctggat
cagggctga

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