Bifidobacterium bifidum BGN4: BBB_0231
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Entry
BBB_0231 CDS
T02135
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00300
Lysine biosynthesis
bbf01100
Metabolic pathways
bbf01120
Microbial metabolism in diverse environments
bbf01230
Biosynthesis of amino acids
Module
bbf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBB_0231 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbf01002
]
BBB_0231 (dapE)
Enzymes [BR:
bbf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BBB_0231 (dapE)
Peptidases and inhibitors [BR:
bbf01002
]
Metallo peptidases
Family M20
BBB_0231 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AFL03827
UniProt:
I3WG14
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All DBs
Position
281227..282459
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AA seq
410 aa
AA seq
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MAAAGADPRSAIAPITCDTTGTREKALASLLEQIMDSYSVSDDEKPLADAVEAFLRSKPH
LTVHRHGDTVVASTSLGRPRRVVLAGHLDTVPVIDNFPPRWLAPGDPLIREDVAAAHPGG
RVMWGRGATDMKASDAVFLYLAATLVDPQYDLTYVFYDHEEVAAEKNGLRKVAEAHPDWL
AGDFAIIGEPTDCGIEGGCNGTMRFDVVTHGVAAHSARAWMGENAIHKAADVLNRLNSYE
PRTITVDGLDYREGLNATLISGGKGTNVIPDECRVHVNYRFAPDKTLPQAKALMMGADAG
AELGNGEHVATGGVFEGFGIEMKDESPSARPGMDAPMAVSLAKLVRERTGREPLAKLGWT
DVARFSLLGVPAVNLGAGSPLLAHKHDEQIAESELATMAGILEDWLTGRA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccggcgctgacccgcgctcggcgatcgcgccgatcacctgcgacacgacc
ggcacgcgtgagaaggcgctcgcctcactgctcgaacagatcatggactcgtattccgtc
agcgatgacgagaagccgctggccgacgccgtggaggcgttcctgcggtcgaagccgcac
ctgacggtgcacaggcacggcgacacggtggtcgcgtccacgtcgctcggcaggcctcgg
cgcgtggtgctcgccgggcaccttgacacggttccggtgatcgacaacttcccgccgcgc
tggctggcgcccggcgacccgctgatccgggaggatgtcgccgcggcgcaccccggcggg
cgggtgatgtggggccgcggcgcgaccgacatgaaggcatccgacgcggtgttcctgtac
ctcgccgccacgctggtcgacccgcaatatgacctgacgtacgtgttctacgaccatgag
gaggttgcggccgagaagaacggtctgcggaaggtggccgaggcgcatcctgattggctc
gccggcgatttcgcgatcatcggcgagccgaccgactgcggcatcgagggcggctgcaac
ggcaccatgcggttcgacgtggtcacgcacggggtcgcggcgcattcggccagggcatgg
atgggggagaacgccattcacaaggccgccgatgtcctgaaccgcctgaactcctacgag
ccgcgcaccatcacggtggatgggctggattatcgcgaggggctgaacgcgacgctgatt
tccggcggcaaggggacgaatgtcatccccgacgaatgccgtgtccatgtgaactaccgg
ttcgcgcccgacaagacgctgccgcaggcgaaggcactgatgatgggcgcggatgccggc
gcggagctcggcaatggcgagcatgtcgccaccggtggcgtgttcgagggcttcggcatc
gagatgaaggacgagtcgccgtccgcccggccgggcatggacgcgccgatggcggtgtcg
ttggcgaagctggtgcgtgagcgtacgggacgggaaccgctggcgaagctcgggtggacc
gatgtcgcgcggttctcgctgctgggtgtgcccgcggtgaacctgggcgcggggagcccg
ctgcttgcgcacaagcatgacgagcagatcgccgaaagcgagttggcgaccatggccggc
atcctggaggactggctcaccggccgcgcgtga
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