Bifidobacterium bifidum BGN4: BBB_0405
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Entry
BBB_0405 CDS
T02135
Symbol
uvrD
Name
(GenBank) putative ATP-dependent DNA helicase
Organism
bbf
Bifidobacterium bifidum BGN4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
AAA_22
AAA_16
AAA_19
UvrD-helicase
NB-ARC
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFL04000
UniProt:
I3WGI7
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All DBs
Position
495849..500132
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AA seq
1427 aa
AA seq
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MKAVEALLEGESGKALLVVGAPCVGKSTLARDALMAGLRRFGESGAIMTVSGRQIADVIG
DQVIRELGATSQARPVTTLSAIAFRLITVMRSRSGEPLPRLLNGAEQDALLRSVCSVHVA
HVRAGDPCGTCSLLREYFARDDWDGVLADAVAGNDGEGGDADSGVGVNAAFVMQLRDMLA
RMDELGVSEDREGTALSALRHWSPRVERLHVQWRLAFALRREYETAVSRMYPGEYRLDSS
RLLVEGAKAVGMVGDDDLPRLLVVDDCQDLTFAGFTFLKALRGAGTRLLLVGNPDEAVQT
FRGSYPEYLFDQIRRQLGADMVRLPAGGAGNGRVEERAVDHVDGYTYRDLVASRISLSIR
STQDETVPLPQRPGKLPQLPASLPIVALPQADPLPGDGSLKTALYRSADEETEDVVWRIK
QAHILEGRNWNDMAVIAHDNATVRTIGERLRHDGVPVRYSSVTRPLKDEPFVQGLFALLE
LAMLRNQAVPALGMNLQQTALYVRSRVAAVMGCPLVSVGGGRDREGYPARLEPVDAAMNA
LASLGKIVTCEDICKGDASDDVPGGAADDAGKTGDAGIAGDTARMHALGRLMHGWEQWRE
WAVSGRDRKTITDDTIIDVKAPQGDELQFGVDAMYLLLEFADDAHAMHGGVAGLGGTGDV
VDDAGSAAGAGTKGASGITADDVLAAVQEVCGRGDPHSRVFAHLWNLVGTVAQGLRQLPA
KEPQYALSVAWNACDVASRWQREALNNTDAGRAANDRLDTAMRLFDYASGSAASRDLPEF
FAQVRAMRIEADSLAKVAPIDEAVTLTTPAGSSGRHWPLVWIPAIQQGIWPNLAARNTMF
GGEDLADVMLYGGLSDDSGEHGDNKLESVLYAEQKSLLVALTRASEQVTASAVYNDDLTP
SDFLYGYMPERFNRERHASAEGREYTQVGEAGRLQGLDADPRGLVAAARVALAVYPRGSK
ESQDAVDALRLLASNGVEAADITRWPFLDEVEDASSGSRTVGSRAAAPEPDKAAEGTGQS
SVPRIATLSPSAVDSIWGCPVCWMMENRFTGPRAGSVATSFGSLIHAVAETASNEGLDAA
DWRDDLPIPERVSTVRDRMIAIYEELRDDPTANTNPADQYNATRKDNTAHDVLGHIASYF
VMSNTDEYPVNNVKNFRIGTLESAQCERSFIAVFGLDDILAAYNAMDGVDPIGRDELAAI
MGSLVGGWPEAMNDRLTVRLSGRIDRMETRIMPDGKRHVRLIDYKTGKVPSTKAIFNDLQ
LVCYQLGLAFPENGPRGAEALQVMPDIAQSGLFHVAQKDAPATSGTSNAQEGMYQPALFA
DGSLNTSSFMPRNRYKTLDKLSDAPDLIEEPPTGVSAAAWRQFLGMRGTQAVWSLSMIAR
VFYAAAASRSAHIQARPKPDHLQYCRMKAACPACAGEINTVFETRQS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggttgaagcactgcttgagggggaatccggcaaggcgctgctggtggttggt
gctccttgcgtgggcaagagcacgctggcccgtgatgccttgatggccgggctgcgacgg
ttcggcgaatccggagcgataatgacggtatccgggcgtcagatcgccgatgtgataggc
gatcaggtgattcgcgagctgggggcgacctcccaggcgcgaccggtcacgacgctgtcg
gccatcgcgttccggctgatcaccgtcatgcgttcgaggtcgggcgagccgctgccgagg
ttgctgaacggcgccgagcaggatgcgctgctgcgttcggtgtgctccgtccatgtggct
catgtgcgggcgggggatccatgcggcacgtgctcgttgctgcgcgaatacttcgccagg
gatgattgggacggcgtgctggccgatgccgtggccgggaacgacggcgagggtggtgat
gcggattccggcgtaggcgtcaatgccgccttcgtcatgcagctgcgcgatatgttggcc
cgcatggatgagctgggcgtctccgaggatcgtgaaggaacggccctgtcggcgttgagg
cattggtcgccgcgcgtcgagcgtttgcatgtgcagtggcgtctcgcattcgcgttgcgc
cgcgaatacgagaccgcggtgagtcgtatgtacccgggcgagtaccggttggactcgtcg
cgtctgctggtcgagggggccaaggcggtcgggatggtcggcgatgacgatctgccgcgt
ttgctggtcgtcgatgactgtcaggacctcaccttcgccgggttcacgttcctgaaggcg
ctgcgcggtgcggggacgcggctgctgctggtcggcaatccggacgaggccgtgcagacc
ttccgtgggtcatatccggaatacctgttcgaccagattcgtcgtcagcttggcgccgac
atggttcgtctgccggctggcggtgccggaaatggccgagttgaggagcgtgcggtggac
cacgtcgacggttatacgtatcgcgatctggtcgcatcccgtatctccctgtccatccga
tccacgcaggacgagacggttcctctgccgcagaggccgggcaaattgccgcagctgccg
gcgagcctgccgattgtcgcattgccccaggccgatccgctgccgggcgatggcagtctg
aaaaccgcgctgtaccgctcggccgacgaagagacggaagacgtcgtatggcgcatcaag
caagcgcacatccttgaaggacgcaactggaacgacatggctgtcatcgcgcacgacaac
gccaccgtgcgcacgatcggcgaacggctgcgtcatgacggcgtgcctgtacggtattca
tcggtcacacgaccgttgaaggacgagccgttcgtgcagggattgttcgcgctgctcgaa
ttggcgatgctcaggaaccaggcggtgcccgcgctgggcatgaatctgcagcagaccgca
ctgtatgtgcgctctcgggttgccgcggtgatgggatgcccgctggtcagcgtcggcggc
ggacgggatcgtgagggatacccggccaggctggagccggtggacgccgccatgaacgcg
ttggcatcactcggcaagatcgtcacgtgcgaggacatatgcaagggggatgcgtccgac
gatgtgcctggcggtgccgccgacgatgcggggaagaccggtgacgctggaattgctggt
gacaccgctcgaatgcatgccttgggcaggctcatgcacggatgggagcaatggcgcgaa
tgggccgtctccgggcgcgatcggaagaccatcaccgacgacacgatcatcgatgtcaaa
gcaccgcaaggcgacgaactccagttcggcgtcgatgccatgtacctgttgctggaattc
gcggatgacgcgcatgcgatgcatggcggtgtcgccggtctaggcggtacaggtgacgtt
gtcgacgatgccggttccgctgccggggcgggcacgaagggcgcgtccggtataaccgcc
gatgacgtgctcgccgccgttcaggaggtgtgcgggcggggagacccgcattcccgcgtg
tttgcccacctgtggaatctggtggggacggtggcccaaggcctgagacaactgccggcg
aaggaaccacagtatgcgttgtccgtggcttggaacgcgtgcgacgtcgcctcccgttgg
cagcgcgaggccctgaacaacacggatgccggacgtgccgccaacgaccgtctggatacg
gccatgcggctgttcgactatgcatccggctcggccgcaagccgggatctgcccgaattc
ttcgcgcaggtgagggcgatgcgcatcgaagcggattccctggccaaagtggcccccatc
gacgaggccgtgacactgaccacgccggcgggctcctcggggagacactggccgttggtg
tggattccggccatccagcaaggcatatggccgaacctggcagcccgaaacacgatgttc
ggtggtgaggatctggctgatgtcatgctgtatggagggctgtccgatgattccggagag
catggcgacaacaaactggaatccgtgctgtatgcggagcagaaaagcctgctggtcgcg
ctgacccgcgcatcggagcaggtcacggcaagtgcggtgtacaacgacgatctgacccca
tctgacttcctgtacggatacatgccggaacgattcaaccgcgaacggcatgcgtcggcc
gaagggcgggaatatacccaggtcggtgaagccggacggctccaaggtctggacgccgat
cctcgcggcctggtcgccgccgcccgcgtggcgctcgccgtatacccacgaggttccaag
gaatctcaagatgccgtggatgcgctgcgactgctggcaagcaatggggtcgaagccgct
gacatcacgcgttggccgttcctcgacgaggtcgaggatgcgtcttccggctcccgcacg
gtgggatcgcgggcggcggctccggaaccggacaaggccgcggagggaaccggccaatca
tcggtgccgcggatcgcaacattgtcgccatccgccgtggacagcatctggggatgtccc
gtctgctggatgatggaaaaccggttcactggtccgcgcgccggcagtgtggcgacctcg
ttcggctcgctgatccacgccgtcgccgaaaccgccagcaacgagggcctggacgcggcg
gactggcgcgatgacctgccgattccggaacgcgtcagcacggtgcgggaccgtatgatc
gccatctatgaggagctgcgcgacgatccgacggccaacaccaacccggccgatcaatac
aacgcgacgcgcaaggacaataccgcgcatgacgtactgggccacatcgccagctacttc
gtcatgtccaacaccgacgaatacccggtaaacaacgtcaagaacttccggatcggtaca
ttggaaagcgcacaatgcgagcgttcgttcatcgcggtattcggcttggacgacattctt
gccgcctataacgcgatggacggcgtcgacccgatcggccgcgatgaactcgccgccatc
atgggatcgctggttggcgggtggcccgaagccatgaacgaccggctgaccgtgcgtctg
tccgggcgcatcgaccgtatggagaccagaatcatgcccgacgggaagcgtcacgttcgc
ctgatcgactacaagaccgggaaggtgccttcgaccaaggccatattcaacgatcttcag
ctggtctgctaccaactgggactcgcattcccggaaaacgggccgcgcggagccgaagcg
ctgcaagtcatgccggacatcgcgcaaagtggtctgttccatgtcgcacagaaggatgca
cccgcgacgtccggaaccagcaacgcgcaggagggaatgtaccagccggcgctgttcgcc
gatggcagtctgaacacgtcatcgttcatgccgcggaaccgctacaagaccctcgataag
ctttcggatgctcccgatttgattgaagagcctccgaccggtgtaagcgcagcggcatgg
cgacagttcctcggcatgcgcggcacgcaggccgtatggtcgctctccatgatcgcgaga
gtgttctacgccgccgcggcgagtcggtcggctcatatacaggcaaggccgaaaccggat
catctccagtattgccgcatgaaagcggcatgtccggcatgcgccggcgaaatcaacacc
gtcttcgaaacgaggcagtcatga
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