Bifidobacterium bifidum BGN4: BBB_0609
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Entry
BBB_0609 CDS
T02135
Symbol
priA
Name
(GenBank) putative primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBB_0609 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_0609 (priA)
Enzymes [BR:
bbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBB_0609 (priA)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBB_0609 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AFL04203
UniProt:
I3WH40
LinkDB
All DBs
Position
747408..749648
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AA seq
746 aa
AA seq
DB search
MSTNDAQQLAFDGMAPRKRHKRAPAEKIVAAEDPIAQVVLDVQATHLGQTFDYLVEERWS
QAARPGVMVRVRFGGRLLNGVIWKRAAASATPRSALRFLERVISPHVLVSESMRDDITRI
ADAYGGTRANILRLAVPPRVARIDGEQQLAARSLWVGRPRFSHISDELMQRCFDTIQASY
DGAAMLRSSLESSSFAALVMDARPGARAWARDAAWMIAAAMRQNRAAVVVLPGIRQCEDL
AVALEGLGLSRFAPGGAEHGGYSGDFVVLAAGLPPAERYRAYLAAATGQVGCVIGLRAAM
YAPVEGPALFMMVDDAAYQQADGMMPYAQARGVMRLRAESHGGVFVALSYARSPLSQWEC
EDHTAVTAVSGPSASVTPLPAARRDQMPWVRWLNREELARLADPSIGARVPHTAVTVLSK
ALQTGPVLLSIPSDGMQEALGCVKCHAQARCAKCTGPLGRMGDGVPRCRWCAAAAVDWHC
PHCGCERMRVIRVGATGTARELGGLFRGVSVVISSPSQPRGVVEYVDDAPRIVIATPGAE
PRVLPASRQSEQDAGEYRAVAVLDAWNSLYAPGVDARVDALTAWMRVMALCAPRTRGGQG
LLIGECDPAVAHALMMWDSASLARNELLERGQAGMPPVCAVACVWGRRDAVMAALDDIGV
LRGDWASLDVAGEPIPGMLGPVPIAAPVTVSERELESTQDRVKALVRVPVGMRAQLAVRL
RSAVARHMASRTPGELRFQIDPKDLI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaatgacgcgcagcagttggcgtttgacggcatggcgccgcgcaaacgccac
aagcgcgcgcccgccgagaagattgtggccgcggaagacccgatcgcgcaggtggtgctg
gacgtgcaggcgacccatctgggccagacattcgactatctcgtggaggagcggtggtcg
caggccgcacggcccggcgtcatggtgcgggtccggttcgggggcaggctcctcaacggc
gtgatctggaagcgcgcggcagccagcgccacgccccgctccgcgctgagatttcttgaa
cgggtgatcagcccgcacgtgctggtatccgaatccatgcgtgacgatatcacgcgcatc
gccgacgcctatggcggcacgcgggccaacatacttcgcctggcggttcccccgcgcgtg
gcgcgcatcgacggcgaacagcaactggccgcgcgttcgctatgggtgggaaggcccaga
ttctcgcacatctcggacgaactgatgcaacggtgcttcgacacgatacaggcttcatat
gacggcgccgccatgctgcgctcatccctggagagcagctcgttcgccgccctggtgatg
gatgcgcgtccgggagcgcgtgcgtgggctcgtgacgccgcgtggatgatcgctgccgcg
atgaggcagaaccgtgccgccgtggtggtcctgcccgggataagacagtgcgaggatctc
gccgttgccctggagggactgggactgtcccgtttcgcgccgggcggcgccgagcacggc
ggatactccggtgacttcgtcgtgctggccgcaggactgccgccggcggaacggtaccgt
gcctatctggcggcggcgaccggtcaggtcgggtgcgtcatcggactgcgcgccgccatg
tatgctccggtcgaggggccggccctgttcatgatggtggatgatgccgcgtaccagcag
gccgacgggatgatgccgtacgcgcaggcacgcggcgtcatgcgtctgcgtgccgagtcg
cacgggggagtgtttgtggcgctgtcgtacgcccgtagcccgttgagccaatgggaatgc
gaggaccacacggccgtgactgccgtgagcggcccgagcgcatccgtcacgccgttgcca
gccgctcgcagggatcagatgccgtgggtgcggtggctgaaccgcgaggagctggcgcgt
ctcgccgacccgagcataggcgcccgcgtgccgcataccgcggtgacggtgttgtcgaag
gccttgcagacagggccagtgctgctgtccatcccctcggacggcatgcaggaggcgttg
ggctgcgtgaaatgccatgcgcaggctcgttgcgcgaaatgcaccggcccgctggggcgc
atgggtgacggggtgccgcgctgccggtggtgcgctgcggcggcggtcgactggcattgc
ccgcattgcggctgcgagcgcatgcgcgtgatacgggttggcgcaaccggcaccgcccgc
gagctgggcggcctgttccgcggtgtgtccgtcgtcatatcgtcgccgagccagccgcga
ggcgtcgtcgagtacgtggatgatgcgccgcgcatcgtcatcgccacgccgggagcggag
cctcgcgtgctgcctgcatcccgtcaatcggagcaggatgccggcgaatatcgtgccgtg
gcggtcctggacgcgtggaacagtctgtatgcgccgggtgtggacgcccgcgtggatgcg
ctgacggcgtggatgcgggtcatggcgttgtgtgcgccccgcactcgtggcggacagggt
ctgctgattggtgaatgcgatcctgcagtggcccatgcgctgatgatgtgggattcggcg
tcgctcgcccggaacgaattgctggagcgtgggcaggccggcatgcctccggtgtgcgcg
gtcgcatgcgtatgggggcgtcgggatgcggtgatggccgccttggacgatatcggcgtg
ctgcgcggcgattgggcctcgctggatgttgcgggggagccgatacccggcatgctgggg
ccggtgccgatagcggctccggtgacggtgagcgaacgcgagctggagagcacgcaggac
cgggtcaaggccctggtccgtgtgccggtcggcatgcgtgcccaattggccgtccgcctg
cggtccgcggtggcgcgtcacatggcgtcgcgcactcccggcgaactgcggttccaaatc
gatcccaaggatttgatctga
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