Bifidobacterium bifidum BGN4: BBB_0642
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Entry
BBB_0642 CDS
T02135
Symbol
clpA
Name
(GenBank) putative ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bbf03110
]
BBB_0642 (clpA)
Chaperones and folding catalysts [BR:
bbf03110
]
Heat shock proteins
HSP100
BBB_0642 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
AAA_14
TniB
nSTAND3
UVR
bpMoxR
ATPase_2
AAA_28
IstB_IS21
RNA_helicase
NACHT
AAA_18
AAA_3
Mg_chelatase
AAA_7
AAA_24
TIP49
Zeta_toxin
DNA_pol3_delta2
AAA_19
ResIII
T2SSE
NBD_SMAX1
Torsin
Motif
Other DBs
NCBI-ProteinID:
AFL04236
UniProt:
I3WH73
LinkDB
All DBs
Position
783246..785822
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AA seq
858 aa
AA seq
DB search
MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR
KQVEEMIGKGNAAPNGHIPFTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVG
TQVLIKMDVDLGELRSATIDMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGR
NLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG
DVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAG
SADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETI
EILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLT
APPELKELDQKVAKVAAEKDKAIKDQDFEKAAELRDNQEKLEAERKEKESSWREGESDVE
MVVNEDVIAQVISSTTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTR
VGLKDPKRPAGSFIFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFG
APPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVD
FKNTIIILTTNLGTRDISKAANTGFNLGSNAESSYQRMKDQVSSELKQQFRPEFLNRLDD
IIVFRQLTEPQVRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRR
VIQRDIEDAISEKILMGELEDGQRVVVDSEGEGILGEFTFRGEQFDDAKPENEPAAEPAT
EESADKSSDNAAPASQEA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacggtttaccgaccgtgcacggcgcgtgatcgtgttggcgcaggaagaggcg
cgtactctccagcacaactacatcggcaccgaacacctgctgctcggcctgatccgcgaa
ggtgagggggtcgccgccaaggcgctcgcatccaagggagtgaccttggacgacacccgc
aagcaggtcgaggagatgatcggcaaaggcaatgccgcccccaacgggcacattcccttt
actccgcacgccaagcaggtgttggagctgagtctgcgcgaggcgctgcagctcggtcac
agctatatcggcaccgagcacatcctgctcggcctgattcgcgaaggtgagggcgtgggc
acccaggtgctcatcaagatggatgtcgacctgggcgaactgcgttcggccactatcgac
atgatccatggcaacagcggcggcgccaatgcctccggcaagggcgatctggccaacgcc
ggtggcgtgcaggacaagcgcagccagaccggttcggccattctggaccagttcgggcgc
aacctgaccgccgaagcggccgagggcaagctcgacccggtgatcgggcgcaccaacgag
atcgaacgtgtcatggtcgtgctgtcgcgccgcacgaagaacaaccccgtgctgatcggc
gagccgggcgtcggcaagaccgccgtcgtcgaaggcctcgcgcagaagatcaacgccggc
gacgtgccggagacgctgaaggacaagcaggtctattcgctggatctgggctccatggtg
gccggctcgcgctaccgcggcgatttcgaggaacgcctcaagaaggtgctcaaggagatc
aagacgcgcggcgacatcgtgctgttcatcgacgagattcacacgatcgtcggtgccggt
tcggcggacggcgccttgggcgcgtctgacatgctcaagcccatgctggctcgcggtgag
ctccagaccatcggcgccaccaccaccgacgagtaccgcaagtacatcgagaaggacgcg
gcgctggaacgtcgtttccagccgattcaggtgcatgagccgacaatcgcggagaccatc
gaaatcctcaagggcctgcgctcgcgctacgagaaccaccaccacgtgaccatcaccgac
ggtgcgctgcagtccgccgcggagctgtcgtcccgctacatccaggaccgcaacctgccc
gacaaggccatcgacctgatcgacgaggccggcgcgcggctgcgcatcaagcgcctgacc
gccccgcccgagctcaaggaacttgaccagaaggtcgcgaaggtcgccgccgagaaggac
aaggccatcaaggaccaggacttcgagaaggccgccgagctgcgcgacaaccaggagaag
ctggaagcggagcgcaaggagaaggaatcctcctggcgcgagggcgagtccgatgtcgag
atggtcgtgaacgaggatgtgatcgcccaggtgatctcctcgaccaccggcattccggtg
ttcaagctcacccaggccgagtcgaagaagctgctcggcatggagtccgagctgcacaag
cgcatcatcggccaggacgaagcggtttccgcgctgtcccgttcgattcgccgcactcgt
gtgggcctcaaggatccgaagcgtcctgcgggctcgttcatcttcgccggcccgaccggc
gtcggcaagaccgagctggccaaggcgctggccgagttcctgttcgacgatgaggacgcg
ctgattcgcgtggacatgtcggagttctccgagaagtatgcggcatcgcgtctgttcggt
gctcctccgggatacgtcggttatgaggagggtggcgagctcaccgagaaggtgcgccgc
aagccgttctccgtcgtgctgttcgacgagatcgagaaggcccatccggacatcttcaac
acgctgctgcaggtgctggacgacggtcacctgaccgatggtcagggacgcaaggtggac
ttcaaaaacaccatcatcatcctgaccaccaacctgggtacgcgcgacatctccaaggcc
gccaacaccggcttcaaccttggctcgaacgcggagtccagctaccagcgcatgaaggat
caggtcagctccgaactcaagcagcagttccgccccgagttcctgaaccgtcttgacgac
atcatcgtgttccgtcagctcaccgagccgcaggtgcgtcagattgtcgacctcgacatc
aagcagctcaacgaccgtctgttcgaccgtcacatgtcgctggagctcaccccggccgcc
aaggacctgctcgcgcagaagggcttcgacccgctgctcggtgctcgtccgctgcgccgc
gtgatccagcgcgacatcgaggacgccatctcggagaagatcctgatgggcgaactcgag
gacggtcagcgcgtggtggtcgactccgaaggcgagggcatcctcggcgagttcaccttc
cgcggcgaacagttcgacgacgccaagcccgagaacgagccggctgcggagccggcaacg
gaggagtcagctgacaagtcgtctgacaacgccgctcccgcctcgcaggaggcctga
DBGET
integrated database retrieval system
