Bifidobacterium bifidum BGN4: BBB_0738
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Entry
BBB_0738 CDS
T02135
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BBB_0738 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bbf03011
]
BBB_0738 (rpsA)
Ribosome [BR:
bbf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BBB_0738 (rpsA)
Bacteria
BBB_0738 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
S1_2
OB_RRP5_4th
Caudal_act
Motif
Other DBs
NCBI-ProteinID:
AFL04332
UniProt:
I3WHG9
LinkDB
All DBs
Position
896244..897716
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AA seq
490 aa
AA seq
DB search
MAENNTEVTKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEEVFVKVIDVDLDRRRISL
SLKQANDSVDPASEDFDPALYGMPAEYDEQGNYKYPEGFDPNTNEWIAGYEKQREEWESQ
YAAAHELWEEHKAFVAKELENAAASAAEDGQAPKEEKVEETSNYSSDNSSTGTLADSDQL
AALRDQLLGK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacaacactgaagtcaccaaggtcgccatcaacgacattggcaccgaagag
gacttcatcaaggcagtcgattccaccatcaagaacttcgacgatggtgatctggtcgaa
ggtaccgtcgtcaagatcgatcacgacgaggtcctcctggatatcggctacaagaccgag
ggcgtcatcccctcccgcgaactttccatcaagaaggacgtcgatcctgacgaggtcgtc
gaggtcggcgacaccatcgaggcccttgtcgtcaccaaggaagacaaggaaggtcgtctg
atcctgtccaagaagcgtgcccagtacgagcgcgcctggggcgacatcgagaagatcaag
gaagctgacggcgtcgtcgagggcaccgtcatcgaagccgtcaagggcggcctcatcgtc
gacatcggtctgcgtggcttcctgcccgcgtccctcgtcgaaatgcgtcgcgttcgcgac
ctctccccgtacatcggccagaagatcaaggccaagatcctggagctcgacaagaaccgc
aacaacgtggtcctgtcccgccgccagtacctggaggagactcagtccgaagtgcgcgag
accttcctgtcccagctcaagaagggccagatccgcgagggtgtcgtgtcctccatcgtc
aacttcggcgcgttcgtcgatctgggcggtgtcgacggcctgatccacgtctccgagctg
tcttggaagcacatcgaccatccgtccgaggtcgtcaaggtcggcgacaaggtcaccgtc
gaggtgctcgacgtcgatctcgaccgtgagcgcatctccctgtccctcaaggcgacccag
gaggatccgtggcagcgcttcgctcgcacccacgttcccggccagatcgtcaagggcaag
gtcactaagattgtccagttcggtgtcttcatctccgtcgaggatggcatcgagggcctg
gtgcacatctccgagctggcgaaccgccacgtggagaacccggagaccgtcgtcaagccc
ggcgaagaggtcttcgtcaaggtgattgacgtcgatctcgaccgtcgccgcatctccctg
tccctcaagcaggccaacgactccgtcgacccggcttccgaggacttcgatccggctctg
tacggcatgccggcagagtacgacgagcagggcaactacaagtaccccgaaggcttcgac
ccgaacaccaacgagtggatcgccggttacgagaagcagcgcgaggaatgggaatcccag
tacgccgccgcccacgaactgtgggaggagcacaaggcgttcgtcgccaaggagctggag
aacgccgcggcttccgctgccgaggatggccaggctccgaaggaagagaaggtcgaggag
acctccaactactcttccgacaactcctccacgggtactctcgccgactccgaccagctc
gccgctctgcgcgatcagctgctcggcaagtga
DBGET
integrated database retrieval system
