Bifidobacterium bifidum BGN4: BBB_0819
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Entry
BBB_0819 CDS
T02135
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00450
Selenocompound metabolism
bbf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BBB_0819 (csd)
Enzymes [BR:
bbf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
BBB_0819 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
BBB_0819 (csd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFL04412
UniProt:
I3WHP9
LinkDB
All DBs
Position
989455..990726
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AA seq
423 aa
AA seq
DB search
MVDFTAIRAQFPILDQQIHGHPLVYLDSAATSQKPQCVIDAESEFYRTINAGVHRGAHEL
AARSTMAFEDARAKVARLVGANAEEGNEEIVVTAGATAGLNLLATAFGNASLGRGGEAAK
RFALKPGDEIVVSKAEHHSVLLPFQELAYRTGATLKWFDLTEDGRIRSDTADEVITEHTK
VVAITHVGNTTGAITDIAPIIRRAHEVGAIFILDACQSVPHLKVDFHALDVDFAAWSAHK
MYGPTGVGFLYGRRELLEALPPANFGGSMVELAWMDQPAQYMVPPARFEAGTQPVAQVVA
AGVAAEWMMNVGLENIEAHERTIAAELLKIGDIDGVRILGPRENVNRIGTVAFDVAGVHP
HDVGQFIDAQGIAIRVGHHCAQPVHRHFGLYASNRASSGVYNSVDDAHALVEAVAKVRPF
FGL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttacggcgattcgggcgcagttcccgattctggatcagcagatccacggg
catccgctcgtctatctggattctgcggccacctcgcagaagccgcagtgcgtgatcgat
gcggagagcgagttctaccgcacgatcaacgccggcgtgcaccgcggggcgcatgagctg
gcggcccgcagcaccatggcgttcgaggacgcccgcgcgaaggtcgcccgcctggtcgga
gccaacgccgaggaaggcaacgaggagatcgtcgtcaccgccggggccaccgcgggactg
aatcttcttgccaccgcgttcggcaacgcgagtctgggccgtgggggagaggcggcgaaa
cggttcgctctcaagcccggcgacgagatcgtcgtatccaaggccgagcaccattccgtg
ctgctgccgttccaggaactggcataccgcaccggtgccacgctcaaatggttcgatctg
accgaagacggccgcatccgctcggataccgccgatgaggtgatcacggaacacaccaag
gtcgtcgccatcacgcacgtgggcaacaccacgggcgccatcaccgacatcgcgcccatc
atccgccgtgcccatgaggtcggcgcgatcttcatccttgacgcatgccagtcggtgcct
cacctcaaggtcgacttccacgcgcttgacgtcgatttcgccgcgtggagcgcccacaag
atgtacggtcccaccggggtgggattcctgtacgggcgccgtgagctgttggaggccctg
cctccggcgaacttcggcggttccatggtcgagctcgcgtggatggaccagcccgcgcag
tacatggtgcctccggcccgtttcgaggccggtacgcagccggtcgcccaggtggtcgca
gccggtgtggccgccgaatggatgatgaacgtggggcttgagaacatcgaggcgcatgag
cgcacgatcgccgccgaactgctcaagattggcgacatcgacggcgtgcggattctcggg
ccgcgcgagaacgtgaaccgcatcggcacggtggcgttcgacgttgcgggcgtacacccg
catgacgtcgggcagttcatcgacgcgcaaggcatcgccatccgcgtcggccatcactgc
gcccagccggtgcaccgccacttcggtctgtatgcgtcgaaccgcgcatcctctggcgtg
tacaacagcgtcgacgacgctcacgccctggtcgaggccgtggcgaaggtccgtccgttc
ttcggactgtga
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