Bifidobacterium bifidum BGN4: BBB_1004
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Entry
BBB_1004 CDS
T02135
Symbol
fadD
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00061
Fatty acid biosynthesis
bbf00071
Fatty acid degradation
bbf01100
Metabolic pathways
bbf01212
Fatty acid metabolism
bbf02024
Quorum sensing
bbf04146
Peroxisome
Module
bbf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BBB_1004 (fadD)
00071 Fatty acid degradation
BBB_1004 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BBB_1004 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBB_1004 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bbf01004
]
BBB_1004 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbf04147
]
BBB_1004 (fadD)
Enzymes [BR:
bbf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BBB_1004 (fadD)
Lipid biosynthesis proteins [BR:
bbf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BBB_1004 (fadD)
Exosome [BR:
bbf04147
]
Exosomal proteins
Exosomal proteins of breast milk
BBB_1004 (fadD)
Exosomal proteins of breast cancer cells
BBB_1004 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AFL04596
UniProt:
I3WI83
LinkDB
All DBs
Position
complement(1204944..1206758)
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AA seq
604 aa
AA seq
DB search
MLKEYTQPVTKPIDGDKNVFSVVVERAERKPDEPLVSYKDGTGSWRSFTAAEFRDKVIAL
AKGLIARGVMPGDAVSIISSTSWQWAALDMAIMSIGSLTVPVYETNSPAQVATIFNDSQV
TMAFAENDAQRDKIESVRSRCSTLKDVYVIDFGALNTLEEYGRGVSDEEFWERERLVKGD
DLATIVYTSGSTGMPKGIELSHGNFVYVTYAGTQSMPDIAYGRDRRLLLFLPLAHAFARY
MVLYCFAGDVELGLSNNLKTILSDFGEFKPSFILAVPRIFEKVYNAASQKAGAGMKGRIF
AKAAATAREWSHAQQEGNGFSASLRMRHAMYDRLIYRTIMGVFGGHCEYAVSGGAPLDGA
IAHFFNGVGLPLLEGYGMTETCAPAMVNPTKGYRIGTVGLPLQGVSVGLGEDGELCIKSR
AVCVGYHNHPEITQSQIVDGWLHTGDLGDIDDDGFVTITGRKKDLIITAGGKNVSPGILE
ASVMTSPVVDQCVVIGDRKPFIAAIVSLDLDETNAWLAAQGVEQVSDLAEAVRNPIVYAE
VERAVNAANDLVSRAESIRKFEIVPEPFTEENGLLTASMKARRQAVIDHFGELIDTRIYA
PKGR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggaatatacgcaaccggtcaccaagcccattgacggcgataaaaacgtgttc
tcggtggtggtcgaacgcgctgaacgcaagcccgacgagccgctggtctcgtacaaggac
ggtaccggctcatggcgctcgttcacggccgccgaattccgcgacaaggtcatcgcactg
gccaagggcctgatcgcccgtggcgtcatgccaggggacgcggtgtcgatcatctcttcc
acctcatggcaatgggctgctctggacatggccatcatgtccatcggctccctcaccgtg
cccgtctacgagaccaactcgccggctcaggtcgccacgatcttcaatgactcccaggtg
acgatggcgttcgccgagaacgatgcgcagcgtgacaagatcgagtccgtccgctcgcgc
tgcagcacgctgaaagacgtgtacgtcatcgatttcggtgcgctgaacacgctggaggaa
tacgggcgtggagtgagtgacgaggagttctgggagcgcgagcgtctggtgaagggtgac
gacctggcaaccatcgtgtacacgtcgggctccaccggcatgccgaagggcattgaactg
tcacacggcaacttcgtgtacgtcacctatgccggtacgcaatccatgcccgacatcgcc
tatgggcgtgaccgccgtctactgctgttccttccgctggctcacgcattcgcgcggtac
atggtgctgtactgctttgccggtgacgtggagctggggctgtccaacaacctcaagacc
attctgtctgatttcggcgagttcaagccgtccttcatactggccgtgcctcgcatcttc
gagaaggtgtacaacgccgcctcgcagaaggcgggtgccggcatgaaggggcgcatcttt
gccaaggccgcggccaccgcacgcgaatggtcgcacgcgcagcaggagggcaacgggttc
tcggcctcgctgcggatgcgccacgccatgtacgaccgcctgatctatcgcacgatcatg
ggcgtgttcggcggccactgcgaatatgcggtgtccggaggcgctcctctggacggggcc
atcgcacacttcttcaacggtgtcggactgccgctgcttgaggggtatggcatgacggag
acctgcgccccggccatggtgaatccaaccaagggatatcgcatcggcacggtcggcctg
ccgctgcagggggtgtcggtagggctcggcgaggacggcgaactatgcatcaagagccgt
gcggtctgcgtcggataccataaccatcctgaaatcacccagagccagatcgttgacgga
tggttgcacacgggggacctcggcgacatcgacgacgacgggtttgtcaccatcaccgga
cgcaagaaggacctgatcatcacggcaggcggcaagaacgtgtctccgggtatattggag
gccagcgtgatgacatcgccggtggtggaccagtgcgtcgtcatcggtgaccgtaagccg
ttcatcgcggcgatcgtctccctggatctcgatgagaccaacgcctggctggccgcgcag
ggtgtggagcaggtctccgacctcgccgaagccgtgcgcaacccgatcgtctacgccgag
gtcgagcgcgcggtcaacgccgccaacgatctggtgtcgcgggcagagtcgattcgcaaa
ttcgagatcgtgccggagccgttcaccgaggagaacggactgctgaccgccagcatgaag
gcacgccgtcaagcggtgatcgaccacttcggcgaactcatcgacacgcgcatttacgcc
ccgaagggccgctga
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