Bifidobacterium bifidum BGN4: BBB_1010
Help
Entry
BBB_1010 CDS
T02135
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03030
DNA replication
bbf03430
Mismatch repair
bbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBB_1010 (holA)
03430 Mismatch repair
BBB_1010 (holA)
03440 Homologous recombination
BBB_1010 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_1010 (holA)
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_1010 (holA)
Enzymes [BR:
bbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBB_1010 (holA)
DNA replication proteins [BR:
bbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBB_1010 (holA)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBB_1010 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AFL04602
UniProt:
I3WI89
LinkDB
All DBs
Position
complement(1211746..1212723)
Genome browser
AA seq
325 aa
AA seq
DB search
MANKAGSQAPFIIVFGGDAYLNKRTGRDLIRRALHDRPDAERIDLDATGCDQYAFDEAVS
PSLLADVAVVVVDNLQNADDKLGESMVRYCRQACADPGASSIVICRHEGGVKGKRLLDQL
VKAGACKETVADLKKPEAKLNFVLQIFEGEHRRVEPLAAQQLVAVLGERTGEMAAMCSQL
CFDFDDDPITLDLVNRYLTSNPQVTGFSVADKAIAGRTAEAIIAMRSAVEQGTDPIALIG
ALAMKLRTIAKASAVKAGTITQAQAKTNPWVLKNAMRQLSGWTSAGLGQCIRMLAWADEQ
SKTNGGDPVYALERCIELISHKGRD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaggcaggctcgcaagccccgttcatcatcgtgttcggcggtgacgcatat
ctcaataagcgaaccgggcgcgatctcatccgccgtgcgctgcacgatcggcccgacgcc
gagcgcatcgacctggatgcgaccggctgcgaccaatacgcattcgatgaggccgtcagc
ccttccctgctcgccgatgtcgccgtggtcgtcgtcgacaatctgcagaacgccgacgac
aagctgggcgaatccatggtgcgctactgccgtcaggcatgcgccgatccgggtgcatcc
agcatcgtcatctgccggcatgaaggaggggtcaagggcaaacggctgctcgaccaactc
gtcaaggcgggcgcgtgcaaggagacggtcgccgacctgaagaaaccggaggcgaaactc
aacttcgtgctgcagatattcgagggggagcaccgccgcgtcgagccattggccgcccag
cagctcgtcgcggtgctcggcgagcggaccggagaaatggccgccatgtgctcccaactg
tgcttcgatttcgatgacgaccccatcaccctggatctcgtcaaccggtacctgacctcg
aacccgcaggtgaccggtttctccgtggcggacaaggccattgccggccgcacggccgag
gccatcatcgccatgcgttccgccgtcgaacagggaacggaccccatcgcgctgatcggc
gcgctcgcgatgaaactgcgcaccatcgccaaggcatccgcagtcaaggccggcaccatc
acgcaggcccaggcgaaaacgaacccgtgggtgctgaaaaacgccatgagacagctttcg
ggttggacctcggcgggactcgggcagtgcatccgcatgctcgcctgggcggacgaacag
agcaaaaccaacgggggcgaccccgtatacgcgctggagaggtgcatcgaactgatcagc
cacaaaggaagggactga
DBGET
integrated database retrieval system
