Bifidobacterium bifidum BGN4: BBB_1077
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Entry
BBB_1077 CDS
T02135
Name
(GenBank) putative transcriptional regulator
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBB_1077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_1077
Enzymes [BR:
bbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBB_1077
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBB_1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
HTH_DeoR
KIF21A
HTH_11
HTH_24
MarR_2
HTH_AsnC-type
HTH_IclR
HTH_PafC
MarR
TaqI_C
LacI
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AFL04669
UniProt:
I3WIF6
LinkDB
All DBs
Position
complement(1282239..1283807)
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AA seq
522 aa
AA seq
DB search
METFDIVKLASYRENNRIEAKAAKGGLPRSMWETYSAFANTYGGVILLGVKEREDGTFET
VGLTPVEAEHLRQDFWNTVSNRSKVSAVLPIESEVEVLEADGGMVLAIHVPRAPRDERPV
YINNDLFGGTYRRRGEGDYRCTRQEISAMLRDQGAETMDSKVLDDLTVADFNTDTVRAYR
NRFRAVRQGSSWTDLDDERFLRAVGAAMVSREDGKLHPTFGGLLMFGNDYDIVRECPHYF
LDYQETLDPTIRWTDRVHSGDGMWSGNLFDFFFRVNLKLAESLKTPFKLNGIFRVDDTPM
HKAIREALANCLFNADYYGVRGVVVRRAPDRLVFENPGDIRTGVEQMRLGGVSDPRNGLV
MKMFSLIDVGERAGTGVPDVFATWANAGLPEPQIEESFGEADRTVLTLMLEPDAKLDQNE
HVFIRGEQITDNNEQLNGLNEQITDNNEQLNGLNEQITERQRIVLRFVEKSPRATYDDMA
HAAGVSSATVRRDAEILIGRGLLKRVGSRKAGQWEVQRGEES
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggagacattcgatatcgtgaagctcgcctcatatcgcgagaataaccggattgaagcg
aaagcagcgaaaggcggtctcccacgcagcatgtgggagacctattccgccttcgccaac
acctatggcggtgtcatcctgcttggcgtcaaagaacgtgaagacggcacatttgaaaca
gtcgggctcacaccagtggaagcggaacatcttcgccaggacttttggaacacggtcagc
aaccggtccaaggtaagcgccgtgctgcccatcgaatcggaagttgaagtgctcgaagcg
gatggtgggatggtgctggctattcatgttccgcgcgctccgcgtgacgaacgccccgtg
tatatcaataatgatctcttcgggggaacctaccgtcggcgtggtgagggcgactaccgt
tgcacgcggcaggagatctcagcaatgctccgggatcagggagctgagacgatggattcc
aaggtgctggacgatctcactgttgccgacttcaatacagacacagtgcgggcatatcgc
aatcgtttccgtgcggtacgtcagggcagttcttggaccgatctcgatgacgagcgtttt
ctgcgtgctgttggcgcggcaatggtgagccgagaagacggtaagcttcatcctacgttc
ggcggtctgcttatgttcggcaacgactatgacatcgtgcgcgaatgtccgcattatttc
cttgattatcaggagactctagatccgacgattcgttggactgatcgtgtccattccggc
gatggcatgtggtcaggcaacctctttgatttctttttccgcgtgaatctcaaacttgcc
gagtctctgaagacccctttcaaacttaatggcatcttccgcgttgatgacactcccatg
cataaggcaattcgcgaggcattggccaactgtttgttcaacgctgattactatggcgtg
cgtggtgtggtggtcagacgcgcacccgatagattggtgttcgaaaatccgggcgatatc
cgaacgggcgttgagcagatgcgtcttggcggggtgtctgatccgcgcaacggtcttgtc
atgaagatgttcagcctaatcgatgtgggcgagcgagctggtacgggtgttcccgatgtg
tttgccacatgggcgaatgcaggacttcctgaaccgcagattgaggagagcttcggcgag
gctgatcgtacggtgctcacgcttatgttggagccggatgccaagctcgatcaaaatgag
catgtattcatccgtggtgagcagataactgacaataatgagcagttaaatggtttgaat
gagcagataactgacaataatgagcagttaaatggtttgaatgagcagataaccgagaga
cagcgaattgttctacgttttgtagaaaagagccccagagcaacatatgacgacatggca
catgccgcgggagtttcatcagcgactgtgcggagggatgctgaaatactcattgggcgt
ggattacttaagcgcgtcggctcgcgaaaagcaggacaatgggaagtccaaaggggagaa
gaatcatga
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