Bifidobacterium bifidum BGN4: BBB_1079
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Entry
BBB_1079 CDS
T02135
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bbf02048
]
BBB_1079 (hsdM)
Enzymes [BR:
bbf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
BBB_1079 (hsdM)
Prokaryotic defense system [BR:
bbf02048
]
Restriction and modification system (R-M system)
Type I R-M system
BBB_1079 (hsdM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
Eco57I
UPF0020
Hydro_N_hd
Motif
Other DBs
NCBI-ProteinID:
AFL04671
UniProt:
I3WIF8
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Position
complement(1285009..1287576)
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AA seq
855 aa
AA seq
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MNKQQLAAKIWESANKMRSKIEANEYKDYILGFIFYKFLSETEVTRLHADGMGDEDLEEL
REDDTETAQYVRDLCGYFISYDNLFSTWVAKKGDFAIANVRDALSAFDRNIDPARKRVFA
GIFDTLQTGLSKLGTDEKSRSKAARDLIYLIKDIPMDSRQDYDTLGFIYEYLISNFASNA
GKKAGEFYTPSEVSQLMSEIVAWHLAGREEINIYDPTSGSGSLLIHIGQAVARRNGNPND
IRYYAQELKENTYNLTRMNLVMRGILPDNIVARNGDTLKSDWPWFDTDETKDETYEPLFV
DAVVSNPPYSQNWEPPEAGEDIRFEYGIAPKSKADYAFLLHDLYHLRDDGIMTIVLPHGV
LFRGGEEGTIRRNLVENHHIQAIIGLPANIFFGTGIPTIVMVLRKHRDDDHVLIVDASKY
FTKEGKNNKLRASDIKRIVDAVTGNRDVDKFSRLVGIDEIRQNDYNLNIPRYVDSSDNAE
SWDVYSTMFGGIPKRDIDALSKYWNVFPGLRRCLFAEENGHSAKLAVQDVREAVNADSDV
KAYIQRYREAFIDYPAYIRGELVGNAANVSIAAEEETLANDLLHRLTDTPLVDAYTAYQV
LDDSWQKTISTDLETIQSEGHDAVRKVDANMVVKKKGGKDVEVPDGWAGHILPFDLVQGK
FLTSDLAEIATYESRLSEIGGEIADILENLDEDDKSSTDAVSEDGDSFVAAELKKAVKSI
GKNPETDFDRALVSAQRLFDEEREVKKNVKNLRSALDEKTRTVIEGLSDEHADDLLAAKW
VEPLQRKLEELPQTAVDELIAAVNALNDKYSTTYSDVCEQIEQAEAELGNMLGQLTGNEF
DMAGIAELKTLLGGE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcagcagctcgccgccaagatctgggagtcggccaacaaaatgcgctcgaag
atcgaagccaacgaatacaaggactacatcctcggcttcatcttctacaagttcctttcc
gagacagaagtcactcgtctgcatgctgatggcatgggggacgaagacctcgaagaattg
cgggaggatgataccgagaccgcgcagtacgtgcgcgatctgtgcggctacttcatctcc
tacgataacctgttctccacatgggtggcgaagaagggggatttcgccatcgccaatgtg
cgcgacgcgctttccgcgttcgaccgcaacatcgaccctgcccgcaagcgcgtgttcgcg
ggcatcttcgacaccttgcagaccggcctgtccaaactcggcaccgatgagaaaagccgc
agcaaggccgcacgtgacctcatctacctcatcaaggacattccgatggacagccggcag
gactacgacactctcggcttcatctatgaatacctgatcagcaatttcgcctccaacgcg
ggcaagaaggccggcgagttctacacgccgagcgaggtctcacagctcatgagcgaaatc
gtggcctggcatctcgccggccgtgaggaaatcaacatctatgaccccacaagcggttcg
ggctcgttgctcatccacatcggccaggcggtggcccgtcgcaacggcaacccgaatgac
atcaggtattacgcgcaggaactcaaggagaacacctacaacctcacgcgcatgaacctt
gtcatgcgcggcatcctgccggacaacatcgtggcccgcaacggagacacactgaaaagt
gactggccgtggttcgacaccgacgagaccaaggatgagacctatgagccgctgttcgtg
gacgctgtggtctcgaatcctccctactcccagaattgggaaccgccggaggccggcgag
gatatccgcttcgaatatggcatcgcgcccaagtccaaggcggactacgccttcctgctg
catgacctctaccatctgcgcgacgacggcatcatgaccatcgtattgccccatggcgtg
ctgttccgtggtggtgaggaaggcactattcgccggaacctggtggagaaccaccacatt
caggccatcatcggcttgcccgcgaacatcttcttcggcaccggcatccccaccatcgtg
atggtgctgcgcaaacatcgcgacgacgatcatgtgctcatcgtggacgcttccaaatac
ttcaccaaggaaggcaagaacaacaagctgcgtgcgagcgatatcaaacgcatcgtggat
gcggtgacagggaatcgtgacgtcgataagttcagccgcttggtgggtattgatgagatt
cggcagaacgactataacctcaatattcctcgctacgtggattcctccgacaatgccgag
agctgggatgtgtattccactatgttcggcggcattcctaagcgggacatcgatgcactc
agcaaatattggaacgtgttccccggactacgccggtgccttttcgcggaggagaacggc
cattcggccaagctcgccgtgcaagacgttcgtgaggcggtgaatgccgactcagatgtg
aaggcatatatccagcgttatcgtgaggcgttcatcgattatccggcttatatacgcggt
gaattggtgggtaatgccgccaatgtgagcattgccgccgaagaggagactctggcaaat
gatctgctacatcgtttgactgatacaccgctcgtagatgcctatacggcatatcaggtg
cttgacgatagctggcagaagaccatctccaccgaccttgaaaccatacagagcgagggc
catgacgccgttcgcaaagttgacgccaacatggttgtcaagaagaaaggcggtaaggat
gtcgaagtgccggatggctgggctggacatatcctgccgttcgatctcgtacaggggaaa
tttcttacctctgatcttgcagaaattgccacatatgaatctcggctgagtgagattggc
ggcgaaatcgctgacattcttgaaaatctggatgaggatgacaagagttcgactgatgcc
gtcagcgaggatggagattctttcgttgccgctgaattgaagaaagcagtgaaatcgatt
gggaagaatcccgagactgactttgaccgtgctcttgtgagtgcacagcggttgtttgat
gaagagcgtgaagtcaaaaagaacgttaagaatctccgttcagcgcttgatgaaaagacc
cggaccgttattgaaggactgagcgatgaacatgctgatgacttgcttgctgccaagtgg
gtggaaccattgcagcgcaagcttgaggagctccctcagacggctgttgatgagttgatt
gcagcggtgaatgcgctgaacgacaagtattcgaccacatactctgatgtgtgcgaacag
atcgaacaggctgaggcagaacttggcaatatgcttggtcaactaaccggcaatgagttc
gatatggccggtattgccgagctgaagaccctgttgggaggcgaatga
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