Bifidobacterium bifidum BGN4: BBB_1258
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Entry
BBB_1258 CDS
T02135
Name
(GenBank) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbf03016
]
BBB_1258
Enzymes [BR:
bbf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BBB_1258
Transfer RNA biogenesis [BR:
bbf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BBB_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
AFL04850
UniProt:
I3WIY7
LinkDB
All DBs
Position
complement(1492096..1493550)
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AA seq
484 aa
AA seq
DB search
MNEDMMTESERTSTLTDPTLGATTGRGKGVFYVHTLGCQMNVHDSERIAGVLEDDGYMPA
TEEQAADKDVDLIIMNTCAVRENAAERMYGTIGLWADLKRTHPNMQIAIGGCMAQLDRKR
IAQKAPWVDAVFGTKNIGSLPRLLDQARMAGTCQVEVADRLDYFPSQLPVARASKVSSWV
SISIGCNNTCTFCIVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIG
DRYAFSKLLRACGDIEGLERVRFTSPHPAAFTDDVIAAMAETPNVMHQLHMPLQSGSDKI
LRAMRRSYRSAKFLDILRKVREAMPDAQISTDIIVGFPGETDEDFEATMDVVRQARFQSA
FTFEYSPRPGTPAAEMEQVSHEVVQERFDRLVKLQEQITEEELAKFEGRDVEVMITGAQG
KKDSATHRVTGRERTGVLVHIGVPDGEPMPQIGDFVTATVTHAGRHNLIADPDVNAGQTY
AVRR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacatgatgaccgagtcggagcgcacctccacattgacggacccgaccctt
ggcgccacaacggggcgcggcaagggcgtattttacgtgcacacgctgggatgccagatg
aacgtgcatgattccgagcgaatcgccggtgtgctcgaagatgacggatacatgccggcg
accgaggaacaggcggcggacaaggacgtcgacctgatcatcatgaacacgtgcgcggtg
cgggagaacgccgcggaacgcatgtacggcaccatcggcctgtgggcggacctcaagcgc
acgcatccgaacatgcagatcgcgatcggcggatgcatggcccagcttgaccgcaagagg
atcgcacagaaggcgccgtgggtggatgcggtgttcggcacgaagaacatcggctcgctg
ccgcgcctgctggatcaggcccgcatggcggggacctgccaggtcgaagtggccgacagg
ctggactatttccccagtcagctgccggtcgcccgcgcttcgaaggtgtcgagctgggta
tccatctcgatcggctgcaacaacacgtgcacgttctgcatcgtgcccaccacgcgtggc
aaggagcatgaccgccgtcccggcgacatccttgcggagattcgccgatgcgtggatgaa
ggcgccaaggaggtcacgctgctcggccagaacgtcaactcgttcggttacggcatcggc
gaccggtatgcgttctccaagctgctgcgggcctgcggagacatcgagggattggagcgt
gtgcgtttcacgtcgcctcatccggcggcgttcaccgacgacgtgatcgcggcgatggcc
gagacgccgaacgtcatgcaccagctgcacatgccgttgcagtcgggctccgacaagatc
ctgcgtgcgatgcgtcgctcctaccgttccgccaagttcctggatatcctgcgcaaggtg
cgcgaggcgatgccggacgcgcagatcagcaccgatatcatcgtcggattccctggcgag
acggacgaggatttcgaggcgacgatggatgtggtgcgtcaggcgaggttccagtcggcg
ttcacattcgaatactcgccgcgtcccggaacccccgcggccgaaatggagcaggtctcg
catgaggtcgtgcaggaacggttcgaccggctggtgaagcttcaggagcagatcacggaa
gaggagctcgccaagttcgagggccgtgacgtcgaagtgatgattaccggggcccaaggc
aagaaggattccgcgacacatcgcgtcaccggtcgtgaacggaccggcgtgctggtgcat
atcggcgtgccggacggcgagccgatgccgcagatcggtgatttcgtgaccgcgaccgtc
acccatgccggtcgccacaacctcatcgccgacccggatgtcaacgccggccagacgtat
gcggtccgccggtga
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integrated database retrieval system
