Bifidobacterium bifidum BGN4: BBB_1268
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Entry
BBB_1268 CDS
T02135
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00220
Arginine biosynthesis
bbf00240
Pyrimidine metabolism
bbf00250
Alanine, aspartate and glutamate metabolism
bbf01100
Metabolic pathways
bbf01110
Biosynthesis of secondary metabolites
bbf01240
Biosynthesis of cofactors
Module
bbf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BBB_1268 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBB_1268 (carB)
00220 Arginine biosynthesis
BBB_1268 (carB)
Enzymes [BR:
bbf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BBB_1268 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
GARS_A
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AFL04860
UniProt:
I3WIZ7
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All DBs
Position
complement(1503727..1507107)
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AA seq
1126 aa
AA seq
DB search
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL
DAIDRGEDRELFKKVVDEAGAESARSEVAHSMKEVDAVAAELGYPLVVRPSFTMGGLGSG
IAHDEEELHRIAGAGLHYSPTDEVLLEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVHPDTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPRLTTSMKSVGEAMALGGNFQESLGKAMRSIDKRHMGFSWDGDKPDEAEV
AELLKAITVPTEHRYLQIQRALWGGATERQIFDATKIDPWFVKQLALINQTAMEVRDAEK
LTAKLLKKAKLAGLSDLQIAHLRNLGDEGENTIRELRWTYGLRPVYKTVDTCAAEFDAVT
PYYYSCYADETELRKRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSNRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLRREHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSY
VLGGRGMEIVYDDAQLTKYVNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GEELYIGGIMEHIEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAISKGCGVKGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPKGDG
GDIHRGQQVAIKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYDGGLPTSGNVFISVNDTDKRQLPLMAVRLVELGFSIWATEGTASVLRRYGIDSKIVDK
ISTRVDSDPDAAVKVEHAVGGIGKNVVELIEEGKIDMILNTPNSRGSRSDGYSIRAAAIA
ADLPQFTTMTEFSAVLMAIEAVKHNDYQIMSIQEHAKQLFELESQE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgacatcaagtcagtgatggtcatcggctccggcccgatcgtgatc
gggcaggcggccgagttcgactactccggcacccaggcgtgccgcgtgctgcgcgaagag
ggcatccgcgtcatcctcgtgaactccaacccggccacgatcatgaccgacccggagatg
gccgacgccacctacatcgagccgatcgccacgcccatccttgagcagatcatcgccaag
gaacgccccgacgccctgctgcccaccctgggtggccagaccgcactgaacgccgcgatg
gcgctcggcgaggccggtgtgctcaagaagtacaacgtcgagctgatcggcgcctccctt
gacgccatcgaccgcggcgaggaccgcgagctgttcaagaaggtcgtcgacgaggcgggc
gccgaatccgcgcgctccgaagttgcccactccatgaaggaagtggacgccgtcgccgcc
gaactcggatacccgttggtggtgcgcccgagcttcaccatgggaggcctcggctccggc
atcgcgcacgacgaggaggagctgcaccgcatcgccggcgccggcctgcattactcgccg
accgacgaggtgctgctggaggagggcatcgaaggctggaaggaattcgagctcgaactg
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgatcgagaacgtcgacccggtc
ggcgtgcacaccggtgactccatcaccgtggccccctgcttcaccctgaccgatcgcgaa
taccagaagctgcgtgacatcggcatcgccatcatccgcggcgtgggcgtcgacacgggc
ggctgcaacatccagttcgccgtgcaccccgacaccggccgcatcatcgtcatcgagatg
aacccgcgcgtgagccgttcctccgccctggcatccaaggccaccggcttcccgatcgcc
aagatcgccaccaagctggcgctcggctacaccctcgacgagatccgcaacgacatcacc
cagtccacgccggcctccttcgagccgaccatcgactacgtggtcaccaaggtgccgcgc
ttcgcgttcgaaaagttccccggcgccgacccgcgtctgaccacgtcgatgaagtccgtc
ggcgaggccatggcactcggcggcaacttccaggagtcgctgggcaaggccatgcgctcc
atcgacaagcgccacatgggcttcagctgggatggtgacaagccggacgaagccgaggtc
gccgaactgctcaaggccatcaccgtgccgaccgagcaccgctatctgcagattcagcgc
gctctgtggggcggcgccaccgaacggcagatcttcgacgccaccaagatcgacccgtgg
ttcgtcaagcagctggccctcatcaaccagaccgcgatggaagtgcgcgacgccgagaaa
ctcaccgccaagctgctgaagaaggcgaagctcgccggcctgtccgacctgcaaatcgcc
cacctgcgcaatctcggtgacgagggcgagaacacgattcgcgagctgcgctggacctac
ggcctgcgcccggtctacaagaccgtcgacacctgcgccgccgagttcgacgcggtcacg
ccgtactactactcctgctacgccgacgagaccgagctgcgcaagcgcgaccgcgaggct
gtcatcatcctcggctccggcccgaaccgcatcggtcagggcatcgagttcgactacacc
tgcgtgcacgcggtgcaggagctcggcaaggactatgacacgatcatggtcaactgcaac
cccgagaccgtctccaccgattacgacatgtcgaaccggctgtacttcgagccgctcacc
ttcgaggacgtgctggagatctatgaggccgagaagaagatgggcccggtcaagggcgtc
atcgtccagctcggcggccagacgccgctgtcgctggccgcgcgactcaaggccgccggc
gtgccgatcctgggcaccaccccggagtccatcgacctggccgagaaccgcgagctgttc
ggtgaggtgctgcgccgcgagcacatgaacgcgccgcgctacggcaccgcgctgtcgctc
gaagaggcccgcgaggccgcccacaacatcggctatccggtgctcgtgcgccccagttac
gtcctcggcggacgcggcatggaaatcgtctacgacgacgcccagttgaccaagtacgtc
aaccgtgcgctcgacgaggccaaggccgacacggtcgtgtccggacgcctgccctccccg
ctgctcatcgacaagttcctgcaggacgccatcgaaatcgacgtggatgccctgttcgac
ggcgaagagctgtacatcggcggcatcatggagcacatcgaagaggccggcgtgcactcc
ggcgatgccgcatgcacgctgccgccgagcacgctgtccgacgaccagatccgtcgcctt
cgcgaaggcacctacgccatctccaagggctgcggtgtcaagggcctgatcaacgtgcag
tacgccttcatggccaacacgctgtacgtcatcgaagccaacccgcgtgcctcccgcacc
gtgccgttcgcatccaaggctaccggcgtggccctggccaaggcggccgcccgcatcatg
gcgggggagaccatcgccgatcagcgggccaacggcctgctgctgcccaagggtgacggc
ggtgacatccaccgtggccagcaggtcgccatcaaggagtccgtgctgccgttcaagcgc
ttccgcacgcccgtcggcaagaccgtcgacatcctgctcggacccgagatgcgctccacc
ggcgaggtcatgggcttcgaccgtgacttcccgcacgccttcgccaagagccagctcgcc
gcatacgacggcggactgcctaccagcggcaacgtcttcatctccgtcaacgacaccgac
aagcggcagctgccgctgatggccgtccgtctggtcgagctcggattttccatctgggcc
acggagggcaccgcgtccgtgctgcgccgttacggcatcgactcgaagatcgtcgacaag
atcagcacccgcgtcgactctgacccggatgcggccgtcaaggtcgagcacgccgtcggt
ggcatcggaaagaacgtggtcgagcttatcgaagaaggcaagatcgacatgatcctcaac
acgccgaattcccggggatcgcgttccgacggatattccatccgcgctgcggccatcgcg
gccgacctgccccagttcaccaccatgaccgagttctccgccgtgctgatggccatcgaa
gccgtcaagcacaacgattaccagatcatgagcatccaggagcacgccaagcagctgttc
gagttggagagccaggaataa
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