Bifidobacterium bifidum BGN4: BBB_1358
Help
Entry
BBB_1358 CDS
T02135
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03030
DNA replication
bbf03430
Mismatch repair
bbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBB_1358 (polC)
03430 Mismatch repair
BBB_1358 (polC)
03440 Homologous recombination
BBB_1358 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_1358 (polC)
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_1358 (polC)
Enzymes [BR:
bbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBB_1358 (polC)
DNA replication proteins [BR:
bbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBB_1358 (polC)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBB_1358 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
TTC3_9th
DEDDh_C
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
AFL04950
UniProt:
I3WJ87
LinkDB
All DBs
Position
1625338..1625880
Genome browser
AA seq
180 aa
AA seq
DB search
MLPDGTLPDDYVVLDLETTGVSWYRDTIIEFGAVKVVDRKPVDTYQQLVNPMRNLNPFIT
QLTGITPDMLEPAPTLDTVLPDFLRWCGDDAMIGHNIMQFDIKFIDLAAQRILHHAVPNR
IIDTLQMSRSMYPQYNRHRLVDLIQRFDIADVEEHRALSDAEQTQMCFEYMRDEQRRRDC
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgacgggacactgcccgacgattatgtcgtactggatctggaaaccaccggt
gtcagctggtatcgggacaccatcatcgagttcggagcggtgaaggtcgtcgaccgcaag
cccgtcgacacctatcagcagttggtcaatccgatgcgcaacctcaatccgttcatcacg
cagctgaccggcatcacgccggacatgctcgaaccggcaccgacgctggacaccgtgctg
cccgacttcctgcgctggtgcggcgacgacgcgatgatcgggcacaacatcatgcagttc
gacatcaagttcatcgacctggcggcgcagcgcatcctgcaccatgcggtgccgaaccgc
atcatcgatacgttgcagatgagccggagcatgtacccgcagtacaaccgacaccggctg
gtcgacctgatccagcgtttcgacatcgccgacgtcgaggagcaccgcgcgctgtcggac
gccgagcagacgcagatgtgcttcgaatacatgcgcgacgagcagcgtcgcagagactgc
tga
DBGET
integrated database retrieval system
