Bifidobacterium bifidum BGN4: BBB_1368
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Entry
BBB_1368 CDS
T02135
Symbol
recD
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) alpha subunit
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_1368 (recD)
03029 Mitochondrial biogenesis [BR:
bbf03029
]
BBB_1368 (recD)
Enzymes [BR:
bbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBB_1368 (recD)
DNA replication proteins [BR:
bbf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BBB_1368 (recD)
Mitochondrial biogenesis [BR:
bbf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BBB_1368 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
Viral_helicase1
NTPase_1
AAA_16
DEAD
nSTAND3
AAA_11
TrwB_AAD_bind
cobW
Herpes_Helicase
SLFN-g3_helicase
MeaB
SH3_13
UvrD_C_2
AAA_14
AAA_5
AAA
IstB_IS21
AAA_24
ABC_tran
Zeta_toxin
NAT10_TcmA_helicase
KdpD
AAA_25
TsaE
AAA_7
MMR_HSR1
Zot
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AFL04960
UniProt:
I3WJ97
LinkDB
All DBs
Position
complement(1636019..1637431)
Genome browser
AA seq
470 aa
AA seq
DB search
MRQSEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGANVAVTASTGIAATHIDGQ
TIHSWSGVGLANVLTPNLLKTIKTRRRRKIQAADVLIIDEVSMMHAWLFDMVDQVCREVR
HDPRPFGGLQVVLSGDFFQLPPVSVSGRDRDVLPPGPDFVASRERYAKAGLNPEGFVTES
LVWGELAPVICYLTEQHRQDDGRLLHVLTDIRAGCVDQDDRDALVTRLGVTPQPGEVAVH
LFPVNRQADNLNDSRLARIDKEPHEFHAKQMGPAHLVERLKRNMLAPECLVLKTGAAVMA
LRNDADHQYVNGSLGTVRGFANESKGGWPIVEFENGNIVTMKQATWEMMDGDTVMASVAQ
VPLRCAWAITIHKSQGMTLDRAVMDLSRTFAPGMGYVALSRVERMGGLYLAGVNERMFAV
SADAVMLDGDLRGGSQAASARLGDEGVAAFRPQTPHEDEPAGEFEQAELF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtctgaggcgctcgcgattctgaacgccggcgcgaacgtgttcctgacgggt
gcgcccggcgcaggaaagacgtacgtgctgaacgagttcatccggcaggcgcgcgcagac
ggcgcgaacgtggccgtcaccgcgtcaacgggcatcgccgccacgcatatcgacggccag
accatccactcgtggagcggcgtcggactcgccaacgtgctgacgccgaatctgctgaag
accatcaagacccgtcgtcggcgcaagatacaggcagccgacgtgctcatcatcgacgag
gtgtcgatgatgcacgcctggctgttcgacatggtcgatcaggtgtgccgtgaagtgcgg
catgatccgcggccgttcggtggattgcaagtggtgctgtccggtgacttcttccagctg
ccgccggtctccgtgtccgggcgcgaccgcgacgtgctgccgcccggcccggatttcgtg
gcgtcccgcgaacggtacgcgaaggccggactcaatccggaaggattcgtcaccgaatcg
ctggtgtggggcgaactcgcgccggtcatctgctatctgaccgagcagcatcgtcaggac
gacggccggctgctgcacgtgctcaccgacatccgtgccggatgcgtggatcaggatgac
cgtgacgcgctcgtcacgcggctcggtgtgacaccgcagccgggcgaggtggcggtccac
ctgttccccgtcaaccggcaggccgataacctcaacgattccaggcttgcgcggatagac
aaggagccgcacgagttccatgccaagcagatggggccggcccatctggtcgaacggctc
aagcgcaacatgctggcgccggagtgcctcgtgctcaagaccggtgccgccgtcatggcg
ctgcgcaacgacgccgaccaccagtatgtcaacggttcgctcggtaccgtgcgcggcttc
gccaacgagagcaagggcggctggcccatcgtcgaattcgagaacggcaacatcgtcacg
atgaagcaggccacgtgggagatgatggacggcgacacggtgatggcgtccgtggcgcag
gtgccgttgcgatgcgcatgggcgatcaccatccacaagtcgcaggggatgaccctcgac
cgggcggtgatggatctgagccgcacgttcgcgcccggcatgggatatgtggcgctctcg
cgtgtggaacgcatgggcggattgtatcttgccggcgtcaacgagcgcatgttcgcggtt
tcggcggatgcggtgatgctcgacggcgatttgcgcggcgggtcacaggccgccagcgcg
cggctgggcgacgagggcgtggctgcgttccggccgcaaacgcctcacgaggacgagcct
gctggcgaattcgaacaagccgagctgttctag
DBGET
integrated database retrieval system
