Bifidobacterium bifidum BGN4: BBB_1511
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Entry
BBB_1511 CDS
T02135
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbf03016
]
BBB_1511 (truA)
Enzymes [BR:
bbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBB_1511 (truA)
Transfer RNA biogenesis [BR:
bbf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBB_1511 (truA)
Prokaryotic type
BBB_1511 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFL05102
UniProt:
I3WJN9
LinkDB
All DBs
Position
complement(1810757..1811671)
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AA seq
304 aa
AA seq
DB search
MVGVMRLRIDLAYDGGGFFGWAKQPTIRTVQGEIERVLHTITRVPVDDPAEPLRLTVAGR
TDTGVHASHQVCHLDIGEETLSRCVGHMSVPPTVALKHRLQRMLPADITIHDVTVAPSGF
DARFSALERTYVYRVADRASEVDPRLRGFVLHLDADLDVAAMNEAAAMTIGLHDFGSFAT
PNPGGTTIREVKTAYWRRIPTRPLVVDGMGERYRTPAAESDLLCFTIVADAFARNMVRSL
VGGCIQVGMGKRSTDWFREKMAVPLREGSTGPIAPQGLTLEHVAYPADDELAERAERIRA
KRTL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ctggtgggcgtgatgagattgcgcattgacctggcatatgacggcggcggcttcttcgga
tgggcgaagcagccgacgattcgcaccgtgcagggcgagatcgaacgggtgctgcacacg
attacgcgcgtgccggtcgacgatcccgccgagccgctgcgcctgaccgtcgccggccgc
accgacacgggcgtgcacgcctcgcatcaggtctgccatctcgacatcggcgaggaaacg
ctgagccgctgcgtcgggcacatgagcgtgccgccgaccgtagcgctcaagcaccgtctg
caacgcatgctgcccgcagacatcaccatccatgacgtgacggtcgcgccgagcggattc
gacgcgaggttctccgcactggaacgcacttacgtgtatcgcgtggccgaccgtgccagc
gaagtcgacccgcgtctgcgcggcttcgtgctgcacctcgacgccgacctcgacgtcgcc
gcgatgaacgaggccgccgcgatgaccatcggactgcatgatttcggctcgttcgccacc
cccaatccgggcggtaccacgattcgcgaggtcaaaaccgcatattggcggcggatcccc
acccggccgctggtcgtcgacggcatgggggagcgataccgcacgccggccgccgaatcc
gacctgctgtgcttcaccatcgtcgccgacgccttcgctcgcaacatggtgcgctcgctg
gtcggcggctgcatacaggtcggcatgggcaagcgctcgaccgactggttccgagagaag
atggccgtgccgctgcgcgagggctccacagggccgatcgcgccgcaagggctgacgctg
gagcacgtcgcctatcccgccgacgacgagctcgccgaacgggccgagcgtatacgcgcc
aagcgcacgctgtag
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