Bifidobacterium bifidum BGN4: BBB_1752
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Entry
BBB_1752 CDS
T02135
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf03030
DNA replication
bbf03430
Mismatch repair
bbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBB_1752 (dnaX)
03430 Mismatch repair
BBB_1752 (dnaX)
03440 Homologous recombination
BBB_1752 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_1752 (dnaX)
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_1752 (dnaX)
Enzymes [BR:
bbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBB_1752 (dnaX)
DNA replication proteins [BR:
bbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBB_1752 (dnaX)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBB_1752 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
AFL05342
UniProt:
I3WKC9
LinkDB
All DBs
Position
complement(2088444..2091302)
Genome browser
AA seq
952 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDSGKLTHAYLFSGPRGCGKTSSARILARC
INCAKGPTSHPCGECASCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPDHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLEEICAKESIKPEPGVLKLAMRAGGGSVRDTLSVLDQLMVGAVDGVIAHDAAV
ALLGFTPEALIGEAVDAVIARNGEALYGVVQKVVVGGFDPRRFVEDLLARVRDLLVLTLG
GAQAESVLSDAAEAEDMDDLRRQASSLGLGALTSMAETINITLGSMTGAISPRMRLELLA
ARLLAGREGLDVAPAAGGTAPGADSAGTGRGAAGVNARTGGIAESRSGGTTPRRGGFIGS
ARNQQTDARQSATSQTNTSPSRTTGTQPDRALQTETPTMAEVPATADAQAGAPSPAAQAP
SAARVPSAGEPTAAQSSPQGDDRTPDERWDALVAGLPADVAAYVNRSKVPRIHLEQHEPG
GKGTLWIKFDKALSKYAFAKAVAGEEVGGTRNVVQIMRAETRKAFGDQVQLAPTKKMADG
QVAPPFGQLPADEQQRISAQIVKASLSASLGAMSVGNNAKEPQTPPESGDTASADADEVH
RAVPDALDATVAHDRDNNRAVAQDTSRADAQSAVDPWALPEAGAGDAWSPTDDASHNVSR
DVSRNAPQDEGHHAKHIAVPDLSDDTDPWANDGGNSMPVDGVRGGDAPGTPQNVAHAKSQ
SREDSERTNPGPTAVPESMSAEDPWAGMPSSVASASSSIAAPSAGSPAALQGPSDDLAAP
GRPENPGVEPGTTHLQQTPGAAAGQRASRPAYDDTDPFAGADPYAQEDIPMPTVAPEDDE
YSMNDVSLGSPETMSLDDVKQFFEVVKPVEEYGPDDPKNPRNIQHVNKHDSE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgacgttatcgaccggacacgtttgagggggtcatcggtcag
gatcaggtcactgttccgctgatgcgggccctcgacagcggcaagctcacgcatgcgtac
ctgttttccgggccgcgtggctgcggtaagaccagttccgcgcgtatcctcgcgcggtgc
atcaactgcgccaaggggccgacctcgcatccatgcggggaatgcgccagttgcaaggac
ctcgccactggcggtccaggttccatcgacgtggtggaaatcgacgcggccagtcacaat
ggcgtcgacgacgcccgtgaactgcgagagcgcgccggattcgcccccgctcgggatcgc
tataagattttcattcttgacgaggcgcacatggtcacccagcagggtttcaacgcgttg
ctgaagattgtcgaggaaccgccggaccatgtgatgttcatcttcgcgaccaccgaaccc
gacaaggtgatcggcaccatccgttcgcgtacccatcattacccgttccggctggttccc
caggaggtcatgggaccgtatctggaggagatttgcgccaaggaaagcatcaagccggaa
cccggcgtgctcaagctggcgatgcgcgccggcggcggttcggtgcgtgacaccctgtcg
gtgctcgatcagttgatggtcggcgcggttgacggcgtgatcgcccacgacgccgccgtg
gcgctgctcggcttcacgccggaggcgctgatcggcgaggccgtggacgccgtcatcgcg
cgtaacggcgaagcgctgtatggcgtggtgcagaaagtcgtggtgggaggattcgacccg
cgtcggttcgtcgaggatctgctggcgcgggtgcgtgatctgctggtgctgacattgggc
ggcgctcaggcagaaagcgtgctttccgatgctgccgaggccgaggacatggacgacctg
cgtaggcaggcgtcgtcgcttggcttgggtgcgttgacgtcgatggcagaaaccatcaat
atcaccctggggtctatgaccggggcgatttctccgcgcatgcggctcgaattgcttgcc
gcgcgcttacttgccgggcgagagggactggatgtcgcgccggccgcgggcggcactgcg
cccggggcggactctgcaggtactggccgcggagctgcaggagtgaatgcgcgaacaggc
ggcatcgccgagagccggtcaggcgggacgactccgcgcaggggaggattcatcggatcc
gctcgcaaccagcagacggacgctcgccaatcggcgacaagccagacgaatacgtcaccg
agccgaaccaccggcacccaacctgatcgcgcactccagacggaaacgcccactatggcg
gaagtgcctgcaacagcggatgcgcaagccggtgccccgtctcccgccgctcaagcaccg
tccgccgctcgagtaccgtcggccggtgagccgacagccgcgcaatcctctccgcagggc
gacgaccgcacgccggacgaacgctgggatgcactggtcgccggattgccggcggacgtc
gccgcgtacgtgaaccgcagcaaggtgccgcgcatccacttggaacagcacgagccaggc
ggaaaaggcacgttgtggatcaagttcgacaaggcgctgagcaagtatgccttcgcgaag
gccgtcgctggtgaggaagtcggcggaacccgcaacgtggtgcagatcatgcgcgctgag
acccgcaaggcgttcggcgaccaagtgcagctcgcgcccaccaagaagatggccgacggg
caggtcgcgccgccgttcggccagctgccggcagacgagcagcagcgcatcagtgcccag
atcgtcaaagcgagtctcagcgcatcattgggggcgatgagcgtcggcaacaatgccaag
gagccgcagactcctcccgaaagcggcgacaccgcatcggccgatgcggacgaagtccat
cgagccgtacccgacgcgctggacgcgacagtggctcatgaccgcgacaataaccgggcg
gtcgcacaggatacctcgcgtgcggacgcgcagtcggcagtggatccgtgggcgctcccg
gaagcgggggctggcgacgcttggtcaccgactgacgatgcgtctcacaatgtttcacgg
gatgtttcacggaatgctccgcaagatgagggccatcacgcgaaacacatcgccgtgccg
gatttgagcgacgacaccgacccgtgggccaacgacggcggtaacagtatgcccgttgac
ggtgtacgcggtggcgacgcgcccggcacacctcagaacgttgcccatgcgaagtcacag
tcgcgagaggactccgagcgcaccaaccctggccccaccgccgtgccggagtccatgtcc
gcggaagacccctgggctggcatgccgtcatcagtcgcttccgcttcgtcgagcatcgcc
gcgccaagcgcaggctccccggcagctctccaagggccttccgacgacttggctgcgccc
gggcgcccggaaaaccccggagtcgaaccgggaacgacgcatctgcagcagactcccggt
gccgcagccggtcagagagcatcccgccctgcgtatgacgacaccgatccgttcgccgga
gccgacccgtatgcgcaggaggacattcccatgccgaccgtggcgccggaagacgacgaa
tattcgatgaatgacgtttcacttggctcgcccgagacgatgagtctcgacgacgtcaag
cagttcttcgaagtcgtcaagccggtggaggaatacggccccgacgaccccaagaacccc
aggaacatccagcacgtcaacaaacatgattcggagtga
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