Blattabacterium sp. (Blaberus giganteus): BGIGA_477
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Entry
BGIGA_477 CDS
T02109
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbg
Blattabacterium sp. (Blaberus giganteus)
Pathway
bbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGIGA_477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbg03019
]
BGIGA_477
Messenger RNA biogenesis [BR:
bbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BGIGA_477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
KH-I_KHDC4-BBP
KH_KhpA-B
Romo1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFJ90907
UniProt:
I3QH22
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All DBs
Position
490392..491963
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AA seq
523 aa
AA seq
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MIINVGFSVLMGFMMGIITCFFFGKKTILKKYIQLLEKANFHAKNIINNAEKEGESIKKK
KMLQVKEKFTELKSKHEKDVYLREKKIIDIENKTREKENRLSKEIEIYFKKNNRLEAQIY
DYEKKYKILKKKQEEFKNMHIQQVELLEKISNYSSEEAKNELIEILKVEAKAKAQTHIQN
IIEESQLTAKMEAKKIVIQAIQRIGTEQAVENSVSVFNIESDDVKGRIIGREGRNIRTLE
KATGVEIIVDDTPEAILLSCFNPIRREIARLSLHKLVLDGRIHPARIEEIVTKTEKQIEE
EIIEIGKKNIIDLGIHGIHPELIRMIGRMKYRSSYGQNLLQHSLEVSHLSGILASELGLN
AKLAKRAGLLHDIGKVPENESELPHAILGMQWAEKYGENVEVCNAIGSHHDEIEMKVLIS
PIIQISDAISGARPGVRRNSFESYSKRLKDLENIAFSFDGVNKAFAIQAGRELRVLVESD
KIDDKKAFQLSCDITEKIKNEMTYPGQIKVTVIRETRAVQIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgataataaatgttggattttcggtcctcatggggtttatgatgggaattattacatgt
tttttttttgggaaaaaaactatattaaaaaaatatattcaattattagaaaaagctaat
tttcatgcaaaaaatatcataaataatgcagaaaaagaaggggaatctataaaaaaaaag
aaaatgcttcaagtaaaagaaaaatttacagaactgaaatctaaacatgaaaaagatgtt
tatttaagagaaaaaaaaataattgatatcgaaaataaaacaagagaaaaagaaaataga
ttgtctaaagaaatagaaatttattttaaaaaaaataatcgtttggaagcacaaatatat
gactatgaaaaaaaatacaagattcttaaaaaaaaacaagaagaatttaaaaatatgcat
attcaacaagtagaattacttgaaaaaatatctaattattcttctgaagaagctaaaaac
gaattaattgaaattctaaaagtagaagccaaagcaaaagcacaaactcacatacaaaat
attatagaagaatcacaattaactgcaaaaatggaagcaaaaaaaattgttattcaagca
attcaaagaattggaacagaacaagccgttgaaaattccgtatccgtttttaacatagaa
tcagatgatgttaaaggtcgtataatcggaagagaaggaagaaatataagaactttagaa
aaagcaacaggagtagaaattattgtagatgatactccagaagcaattcttttatcttgt
tttaatcctatacgaagagaaatagcaagattgtcccttcacaaattagttctagacgga
cgtatacatccagctagaattgaagaaatagttacaaaaacggaaaaacaaattgaagaa
gaaataatagaaataggaaaaaaaaatattatagatttaggaattcatggaatacatcca
gaattaatccgaatgataggaagaatgaaatatcgttcttcttatggtcaaaatctttta
caacactctctggaagtttctcatttatcaggaatattagcttccgagttaggattaaat
gctaaattggcgaaacgtgccggattattacatgatataggaaaagttccagaaaacgag
tcagaattgcctcatgccattttaggaatgcaatgggcagaaaaatatggagaaaatgtg
gaagtttgtaatgcaataggttcacatcatgatgaaatagaaatgaaagtattaatatct
cccataatacaaatttcagatgctattagtggagctcgtcctggagtcagaagaaattct
tttgaatcttattcaaaaagactaaaagatttggaaaatatagcgtttagttttgatgga
gtcaataaagcttttgccattcaagcaggaagagaattgcgtgtattagttgaaagtgat
aaaattgatgacaaaaaagcttttcaattatcttgtgatataacagaaaaaataaaaaac
gaaatgacttatcctggtcaaattaaagtgacagtgatcagagaaactagagctgtacaa
atagctagataa
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