Blattabacterium sp. (Blaberus giganteus): BGIGA_520
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Entry
BGIGA_520 CDS
T02109
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bbg
Blattabacterium sp. (Blaberus giganteus)
Pathway
bbg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BGIGA_520 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbg03021
]
BGIGA_520 (rpoD)
Transcription machinery [BR:
bbg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BGIGA_520 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
DnaB_bind
LepB_N
GPW_gp25
Relaxase_C
DUF2175
Motif
Other DBs
NCBI-ProteinID:
AFJ90949
LinkDB
All DBs
Position
537781..538644
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRESESLDKYLHEIGKIPLLTPEEEVEYARRAREGDATAIDKLVNANLR
FVVSVAKQYQNQGLSLCDLINEGNLGLIKGILRFDETRGFKCISYVVWWIRQAILQAIAE
QSRSIRQPTNKLALLNKILKTLAQLEQELQRTPSAREIAEYLDMNEKDVEDSIKNSGRHV
SMDAPLIEGEDSNLYDLVRSDESPRPDEHLEKESLRKDIKRILETLSERERRVIILHFGL
NGSPPMTLEEVGQFCDLTRERVRQIESIALKRLKHSSRSKILKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattactaaacaagtaacaaatcgtgaatccgagtcattggataag
tatcttcatgaaataggtaaaattccattattaactccagaagaagaagtagaatacgct
cgtagagcaagagaaggggatgctactgccatagataaacttgtcaacgccaacttacgt
tttgttgtttctgttgctaaacaatatcaaaatcagggattaagtttatgtgatttaatt
aatgaaggaaatttaggtttgataaaaggaatattacgttttgatgaaacaagaggattt
aaatgcatttcctatgttgtttggtggattagacaagcaattttacaggctattgctgaa
caatcacgttctattagacaacctacaaataaattagctttattaaataaaatactgaaa
actcttgctcaattagagcaagaattgcaaagaactccttctgcaagagaaattgcagaa
tatttagatatgaacgaaaaagatgtagaagattctataaaaaattcaggaagacatgtt
tcaatggatgccccattaatagaaggagaagattcaaatttatatgatttggttagatct
gatgaatctcctcgtccagatgaacatttggaaaaagaatctttacgaaaagatataaaa
agaattttagaaactttgagtgaaagagaacgtcgtgttattattttacattttggatta
aatggatcacctcctatgactttagaggaagtaggacaattttgcgatttgacaagagaa
cgtgttcgacaaattgaaagtatagctttaaaaagattaaaacattcttctagaagtaaa
atcttaaaaccttatttaggataa
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