Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0060
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Entry
UT28_C0001G0060 CDS
T03992
Symbol
rimN
Name
(GenBank) putative ribosome maturation factor tRNA threonylcarbamoyladenosine biosynthesis protein
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbgw03009
]
UT28_C0001G0060 (rimN)
03016 Transfer RNA biogenesis [BR:
bbgw03016
]
UT28_C0001G0060 (rimN)
Enzymes [BR:
bbgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
UT28_C0001G0060 (rimN)
Ribosome biogenesis [BR:
bbgw03009
]
Prokaryotic type
Other maturation factors
UT28_C0001G0060 (rimN)
Transfer RNA biogenesis [BR:
bbgw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
UT28_C0001G0060 (rimN)
Prokaryotic type
UT28_C0001G0060 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AKM81879
UniProt:
A0A0G4B214
LinkDB
All DBs
Position
complement(53655..54200)
Genome browser
AA seq
181 aa
AA seq
DB search
MKIVEQENISSLKDAAEVLKSGGIFVFPTDTVYGIGCGLNQKAIERLYEIKNRPFSQPTA
VLMSKKDIPELLKPEYEKYPEGQVTIIADANKYDIAFPEIVLKDEKIGVRVPDDKWLQSL
LEISGPIVATSANLAGESTPARYSDINPKLLEQVDLVVKSDIISLHSPSTIYDVKENKIL
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagttgaacaagaaaatataagttcactcaaagatgccgccgaagttctaaaa
tcgggcggcatttttgtattcccgacagatactgtttatggaattggctgtggattaaat
caaaaggcgattgagcgactttatgaaatcaaaaaccgtccgttttctcagccgacagcg
gtcttaatgagtaaaaaagatattccagaactattaaaacccgagtacgaaaaatatcca
gagggccaagtgacaattattgcggatgctaataaatacgacatcgcttttccggaaatc
gtcttgaaggacgaaaaaatcggcgttcgtgtgccagatgataaatggctgcaaagtcta
ttagaaatctccggtccaattgtcgcaacgtctgccaacctagcaggggagagtacgccg
gcaagatactccgacattaatccaaaacttcttgaacaggttgatcttgtagttaagtct
gatataatttctttgcattctccatcaaccatttatgatgtaaaagaaaacaaaatttta
agataa
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