Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0109
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Entry
UT28_C0001G0109 CDS
T03992
Name
(GenBank) repair protein RadA, DNA repair protein RadA/Sms protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbgw03400
]
UT28_C0001G0109
DNA repair and recombination proteins [BR:
bbgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UT28_C0001G0109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
Zn_ribbon_LapB
ChlI
ATPase
DUF7125
AAA_22
Lon_C
AAA_24
Rad51
AAA_16
AAA
ABC_tran
AAA_18
AAA_14
Zn_ribbon_8
Zn_Ribbon_YjdM
NTPase_1
AAA_5
NB-ARC
nSTAND3
AAA_33
MCM
NACHT
RuvB_N
AAA_17
nSTAND_NTPase5
KTI12
HypA
AAA_28
Isochorismatase
DZR
DUF5906
RNA_helicase
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AKM81924
UniProt:
A0A0G4B259
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Position
complement(99996..101291)
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AA seq
431 aa
AA seq
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MSNKQTSQIIFVCDDCGDEFAKWQGKCPNCGAWNTLKEFKTQRQKTKPLEDLEVVKLSEV
KSENFQRISTSFIEVDRVLGGGLVPGSLILLGGEPGIGKSTLLLQLAEKMSGTFYVSGEE
SAEQIKMRADRLKLGSKEINFIAETDVDSIISTLLKQKPSLVIIDSVQTMYSENFPSTAG
SIVQVRETALRLQKYAKENHVPVVLVGHVTKDGTVAGPKTLEHMVDVVLYLEGERFHDLR
ILRTTKNRFGATDEIGIFEITGLGLKEVSNPSKVFLAEESANLPGSVITVTVEGTRPLLV
EIQALVSESSFGYPKRTASGFDLNRLQLIVAILVNRGGLNLNSTDVYLNVAGGFRLKEPA
ADLAVAIAIASAYKNKNVEKNTVFFGELGLGGEVRPVNFESKRLSEAKRLGYKQTIQNKL
ISKVLKEAFNV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaacaaacttcccaaattattttcgtctgtgatgattgcggtgacgaattt
gccaaatggcaaggcaagtgcccgaactgcggtgcatggaatacacttaaagaattcaaa
acccaacgacaaaaaacaaaaccactagaagatttagaagttgtaaaactttcggaagtt
aaatcagaaaattttcagcggatatctacctcttttattgaggtcgatcgcgtattaggc
ggaggtttagtgccaggctctttgattttattgggtggtgaacctggtataggaaaatca
acactgcttcttcagctcgcagaaaaaatgtctggcactttttatgtttcgggtgaagaa
tctgccgaacaaattaaaatgcgcgctgatcgattaaagctcgggtctaaggaaataaat
tttatcgcagaaacagatgttgactcaattatttcaactttgttaaagcagaaaccatca
ttggttattatagattcagtgcaaacaatgtattctgaaaattttccctcgacggcaggg
agcatagtccaagttcgcgaaacagcattgcgtttacaaaaatatgctaaagaaaaccat
gtgccagttgttttggtcggtcatgtcacgaaagatgggactgtggcagggccaaaaaca
ctagagcatatggttgatgttgttttatacctcgaaggcgaacggttccatgatttaaga
attcttagaacaactaagaatcgatttggcgctacagatgagattggtatttttgaaatt
accggtcttggcctaaaagaagtatcaaatccttcaaaagtttttcttgcagaggagagc
gcgaacttgccaggctctgtgataacggttaccgttgaaggaacgcgtcctttgttagta
gaaattcaagctctggtttcggagagtagctttggttatccaaaaagaaccgcttctgga
tttgatctaaaccgcttacaattaatcgttgcaattttagtgaatcgcggtggtttgaat
ttgaattccactgatgtgtatttaaatgtcgctggcggtttccgcttaaaagaacctgca
gccgatttggctgtcgcaatcgcaattgcttcggcgtacaaaaataaaaatgttgaaaag
aatactgttttctttggcgagcttgggctaggaggggaagtaagacctgtgaattttgaa
agcaaaagactgagcgaagcaaaaagattaggttataagcaaacaattcaaaacaaatta
atttccaaagtattaaaggaagcttttaatgtttaa
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