Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0138
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Entry
UT28_C0001G0138 CDS
T03992
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosidase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Pathway
bbgw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UT28_C0001G0138 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbgw03400
]
UT28_C0001G0138 (mutM)
Enzymes [BR:
bbgw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
UT28_C0001G0138 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UT28_C0001G0138 (mutM)
DNA repair and recombination proteins [BR:
bbgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UT28_C0001G0138 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
PI3_PI4_kinase
Motif
Other DBs
NCBI-ProteinID:
AKM81953
UniProt:
A0A0G4B3F7
LinkDB
All DBs
Position
complement(131644..132498)
Genome browser
AA seq
284 aa
AA seq
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MPELPEVETIRLGLTDRIIGKKIISVDFDTAKSFQGKTEDVVGSTISGVERRAKLIQIKL
SNNNNLLFHLKLTGQLIVIDHSERFAGGHPSHDWHAELPNSNTRIVFELSDNVKLYFNDM
RKFGWCKVLSPQAIEAIYEKDYGFEPLDKEFTVEYLLSKAKRIPNRNIKQFLMDQTIAAG
MGNIYTDEALFEAGISPLRKIKDISVPEWQKLIDSMCKVLNMGLKYGGTTDSDYVRADGT
KGGMQDHLKVYHQTGKPCANDCGGKVIRITVGGRGTHYCSQCQN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcctgaagtagagacaatacgactgggtttaactgatcgtattattggc
aaaaagattataagtgtcgattttgatactgccaaatcttttcaagggaaaactgaagat
gtcgtcggatcgacaattagtggcgttgagcgccgggccaaactcatacagatcaaattg
tcaaataacaataatttattatttcatttaaaactcactggccaattaattgtcatcgat
cacagtgaaagattcgccggcggtcatccatcacatgattggcatgctgaattaccaaac
tcaaacacacggattgtttttgaattatccgacaacgtcaaactttattttaacgacatg
cgaaaatttggctggtgtaaagttctatcgcctcaggctattgaggcgatctacgaaaaa
gattatggctttgaaccgctggataaagaatttacggttgaatatcttttatcaaaagcc
aaaagaattccgaatcgaaatatcaaacaatttttgatggatcaaactattgccgcaggt
atgggtaatatttatacggatgaagcattgtttgaagcagggatttcccctctaagaaaa
atcaaagatatttccgtgccagagtggcaaaaactaattgatagtatgtgtaaagtgtta
aatatgggattaaagtacggcgggacgacagattcagattatgtcagagcggatggtaca
aagggtgggatgcaagaccacttgaaagtttatcatcaaaccggaaaaccatgtgcgaat
gattgcggcggaaaagtaatcagaattactgtcggcggtcgcggtacccactactgttct
caatgtcaaaattaa
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