Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0220
Help
Entry
UT28_C0001G0220 CDS
T03992
Name
(GenBank) transcriptional regulator CdaR, carbohydrate diacid regulator
KO
K02647
carbohydrate diacid regulator
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbgw03000
]
UT28_C0001G0220
Transcription factors [BR:
bbgw03000
]
Prokaryotic type
Helix-turn-helix
Other families
UT28_C0001G0220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GGDEF_2
Sigma70_r4_2
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AKM82031
UniProt:
A0A0G4B255
LinkDB
All DBs
Position
204232..205350
Genome browser
AA seq
372 aa
AA seq
DB search
MYTNMNDSALKTHKINAHVDGNDIVILNNDGCCIASSSHEKIGSFIDFNPEEQSITQLII
DNQKKASLSYNSKQFNNNEIELLKNLAKVTIEQYIGKIFLPTTSIDQFVTQILEKPLLKE
DIALFNDQAQSFGLNTELNRIAILVEIENFAEDILDSADSNYNPDEIIKDWKNKINNCIC
GFFTLKTDMFTAYTGHGRFVVFKEINTNMETFTKLMKSAYLSIFGPIIESDKDNLHVGFS
NCHRGIDGLRESYQEALQALTLGRKFIRKKDQSYYYGDLGTLRILTEEDEGKKKSFALEV
LEPLDKEALRLTLETFFNEDMDIKKTASRLRIHPNTVNYRLGKIAEHLGLDPKIFRQAFE
LRIALLTDRIFN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaaacatgaatgattccgctttaaaaacacacaaaataaacgcacatgtagat
ggcaacgacatcgttatcctcaataacgacggttgttgcattgcatcatcaagccatgaa
aaaattggttctttcatcgattttaatcccgaagaacaaagcataactcaacttattatc
gataaccaaaaaaaggcttccctatcttacaattcaaaacaattcaacaacaatgaaatt
gaactactaaaaaatcttgccaaagttactattgaacaatatatcggcaagatttttttg
ccgaccacatctattgatcagttcgtgactcagattttagaaaaaccattattaaaagaa
gacatagctctatttaacgatcaggcccagagctttggcttaaatacagaactaaatcga
atcgcaattttagtggaaatagaaaactttgcagaagatattttagacagcgctgattca
aattataaccctgatgaaataattaaggattggaaaaacaaaataaataattgtatttgc
ggtttttttaccttaaaaactgatatgtttaccgcctacaccggacatggtcgctttgtc
gtgttcaaagaaataaacacaaacatggaaacctttactaaattaatgaagagcgcctac
ctttcaatttttggaccaatcatagaatcggataaagataatttacatgtaggtttttcc
aactgtcacagaggaattgatggcctcagggaatcttatcaagaggcactacaagcttta
accttgggaagaaagttcattagaaagaaggatcaaagttattattacggcgatcttgga
acattaagaattcttaccgaagaagatgaaggaaagaaaaaatcgtttgcgttggaagtg
ttagagcctctagataaagaggctcttcgtttgactttagaaacattttttaacgaagat
atggatattaaaaaaacggccagcaggttaagaatccatcctaacaccgtaaactatcga
ctcggcaaaattgcggaacatttaggcttagatcctaaaatttttcgccaagcgtttgag
ctacggattgccctacttacggatagaatttttaattaa
DBGET
integrated database retrieval system
