Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0425
Help
Entry
UT28_C0001G0425 CDS
T03992
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbgw03000
]
UT28_C0001G0425
Transcription factors [BR:
bbgw03000
]
Prokaryotic type
Helix-turn-helix
Other families
UT28_C0001G0425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AKM82231
UniProt:
A0A0G4B2S7
LinkDB
All DBs
Position
383955..384656
Genome browser
AA seq
233 aa
AA seq
DB search
MDIKIEGLDEEEFHVYKALLSLKRGTVLQLAAISGEKRSNLYRILDNLMAKRLVSEIYEG
KKHFYIAESPKVLMDFINQQKERISEIIPELETIEKEALERPKIKFYEGKNGIKNLYDEL
IMPNQEILAFAWPDKLLDKIDFHNEFVKTRLKHNMPVRAIYPDNRAARLRNTGLKESKYS
KKLPAFDATMLISGNKVVLFSMKNWITGVLIDNKEIADCLKALFDGYWGELKK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaaatcgagggtttagacgaagaggaattccatgtctataaagccttactt
tccctaaaaagagggactgttttgcaattagcagccatttccggcgaaaagcgaagcaat
ctttaccgaatcttggacaatttgatggccaaacgtctggtcagcgaaatttatgagggc
aaaaaacacttttatatcgccgaatcgccaaaagttttgatggattttattaatcagcaa
aaagagcgaatatcagagataattcccgagcttgagacaatcgaaaaagaagcgctcgag
cggccaaaaattaagttttatgagggaaaaaacggcatcaaaaatctttatgacgaacta
attatgccaaaccaggaaattctcgcctttgcctggccggataaactactggataagatt
gattttcacaatgaatttgtcaaaacccgcttaaaacataatatgccagtcagagcaatt
taccctgacaacagggcggcccgcttaagaaatacgggcttaaaagaatccaaatattct
aaaaaattgccagcttttgacgccaccatgctaatttcaggcaataaagtagttttattt
tccatgaaaaactggattacaggagtactgatcgacaacaaagaaatcgccgactgccta
aaagctttgtttgacggatattggggcgaattaaaaaaataa
DBGET
integrated database retrieval system
