Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0606
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Entry
UT28_C0001G0606 CDS
T03992
Name
(GenBank) repair protein, DNA end-binding protein Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Pathway
bbgw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UT28_C0001G0606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbgw03400
]
UT28_C0001G0606
DNA repair and recombination proteins [BR:
bbgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
UT28_C0001G0606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF7399
YAL037W_N
Motif
Other DBs
NCBI-ProteinID:
AKM82407
UniProt:
A0A0G4B5W2
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All DBs
Position
complement(557364..558143)
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AA seq
259 aa
AA seq
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MKAIWSGSLNFFLISIPIKLYSASNDRVYNFDMLHKKDLSPIRFARVCVEEEKEVPYAEI
VKGYEYEKDQYVVLTEKDFLQVNSPSYKSINIVGFTDKEKVNRMLDQKPYYLEPNEGAEK
SFALLREALIQTKRIAVAKFSIRNREHLATLQVENGYLILEQIRFQDEIRSPEELKNPAA
SEVTNDELKLAVNLISSLEKPIEIENYKDNFNENLKKIIEQKLSGKEPEAVPVKKPTPVP
DLMKMLQESLKKAKTKTKV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatttggtcgggcagtttaaatttcttcttaattagtattccaattaaactt
tattctgcatcgaatgatcgagtgtataattttgatatgcttcataaaaaggatttatca
ccgattcgtttcgccagagtttgtgttgaagaagaaaaagaggttccgtatgcggaaatc
gtcaaaggctatgaatatgaaaaggatcaatacgttgttttaacggaaaaagactttcta
caagttaattcaccgagctacaaaagcatcaatatagtcggtttcactgataaagaaaaa
gttaatcgaatgctagatcaaaaaccatattatctagagccaaacgaaggcgctgaaaaa
tcttttgccttacttcgcgaagcattaattcaaactaaaagaattgcagtagctaaattt
tccattcgtaacagagagcatcttgcgaccttgcaggtagaaaatggttatttaattttg
gaacaaattcgatttcaagatgaaataagaagcccagaagaattaaaaaatcctgcagcc
tcagaagtaacaaacgacgaattaaaacttgcggttaatttaatatcgagtttagaaaag
ccaattgagattgaaaactacaaagataattttaacgaaaatttgaaaaaaattatcgaa
caaaaactttcaggtaaggaaccggaagctgttccggtcaaaaaacctacgcctgtcccc
gaccttatgaaaatgctacaagaaagtttaaagaaagctaaaactaaaactaaggtttag
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