Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0810
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Entry
UT28_C0001G0810 CDS
T03992
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Pathway
bbgw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UT28_C0001G0810 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbgw03400
]
UT28_C0001G0810 (priA)
Enzymes [BR:
bbgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UT28_C0001G0810 (priA)
DNA repair and recombination proteins [BR:
bbgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UT28_C0001G0810 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
zinc-ribbons_6
DUF4184
Zn_dep_PLPC
Cytochrom_C
Cytochrome_CBB3
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AKM82589
UniProt:
A0A0G4B402
LinkDB
All DBs
Position
complement(724831..726636)
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AA seq
601 aa
AA seq
DB search
MQIAKVIPKVKTSGDGIFDYSIPPEILPQIKCGVLVEVPFHGRTIEAIVMDIRRSSQIQI
LKPIIKIIDPNPVIDNLHLKLAKWMSDYYLAPLGQTLFENIVPSAKRTIKKNESEIAVQP
SSLNLTNNRFLIIADFSRRLKFYLQAIEKTIKRKQSVLILIPDLSLIDYFAPKLKDLIIL
HANLTKTERWIAWDKARRKPFSIVIGSQSALFAPINNLGLIIVDQFESLSFKNDRSPRFS
TVETAKKLTEFSKANLIIGSLTPDIENFYQAQKNYKILKHNFLKPKIEIIDTSNAKSILS
ETLKKNIEKNLFDKKKTLLVFNRKGEGNYYTCTNCNWIFNCKQCDLPLRPFENKAVCQRC
DKTFDLPTNCEKCHGINLKKTGLGTRKLSKIIKDNWPKSTIINLEKDGDELTNDFDIAIA
TNYALKLNLPKIDLVAILDMDSYLYLPDFKSAENAFDTYYKFLKISDQGLIQTSRPDAGL
SKSLAALDYESFFNHEINLRRKESFPPFTKMINLIFQNEDEEICKKDSIKTAKSLNGLKS
NSTEIESLEILGPNPAFVFKKLNKSRWQIIIKHKNVLPENIRAFLLKQRNVIIDVDPVDL
I
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagctaaagtcattccaaaagttaaaacctctggagatggaatttttgattac
tctatcccaccagagattttaccgcaaataaaatgcggtgttttagttgaagtgcctttt
catggaagaacaattgaagcgatagtaatggatattaggcgctcgtcgcaaatacagatt
ttaaaaccaattataaaaattattgaccctaatccggtaatcgataatttacatctaaaa
cttgcgaaatggatgagcgattattatttggccccgttgggacaaacgctttttgaaaat
atcgtgccgtcggccaaaagaacaattaagaaaaatgagtcagagatagcagtccagcca
agttcgctaaacttaacaaataatcgatttttaataatagctgatttttccagacggtta
aaattttatctgcaagccatagaaaaaacaattaaacgtaaacaatccgttttaatcttg
ataccggatctttcattgatagattactttgcaccgaaacttaaagacttaataatcctg
cacgctaacttaacaaaaacagaaagatggattgcctgggacaaagcacgcagaaagcca
ttctccatcgtgataggctctcaatccgccctgtttgcgccaattaataatttaggactc
atcatcgttgatcaatttgaaagtctttcctttaaaaatgatcgctcaccccgcttttca
acagtagaaaccgctaagaaattaacagaattttcaaaagctaatctaatcatcggaagc
ttaactcctgacattgaaaatttttatcaagcacaaaaaaactacaagattcttaaacac
aattttttaaaacccaaaattgaaataatcgatacctcgaacgcgaaaagtattttaagt
gaaacgcttaaaaaaaatattgaaaaaaatttattcgataagaaaaaaactcttttagtt
tttaatcgcaaaggtgagggaaattattatacttgcactaattgcaactggatttttaat
tgtaaacaatgcgacttacccctacgtccgtttgaaaataaagcagtttgtcaaagatgc
gataaaaccttcgatttaccaactaattgtgaaaagtgtcacggcataaatttaaaaaaa
acaggcttaggcacaagaaaattatcgaaaataattaaggataattggccaaaatcgaca
atcattaatcttgaaaaagatggcgatgagttaacaaatgactttgatatcgcgatcgcc
actaattacgcgctcaaattaaatttaccaaaaattgacctggtcgcgattctagacatg
gattcatatttgtacttgccagattttaaaagcgcagaaaatgctttcgatacttattat
aagtttctaaaaatatctgatcagggcttaatccagacttcccgtcctgacgctggtctt
tctaaatcgcttgccgccttagactatgaatcattttttaatcatgaaattaatttaagg
cgtaaagaatcatttccaccctttacaaaaatgattaacttaattttccaaaatgaagat
gaagaaatttgcaaaaaagattcaattaaaaccgctaaatccttgaacggacttaaaagt
aatagcactgaaattgagtcgttagaaattctaggcccgaatccagcatttgtttttaag
aaattaaataagtcccgttggcaaataatcattaaacataaaaatgtacttcctgaaaat
atcagagcatttttgttgaagcagcgaaatgtaattatagacgttgacccggtagactta
atctga
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