Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0885
Help
Entry
UT28_C0001G0885 CDS
T03992
Symbol
gyrA
Name
(GenBank) gyrase (subunit A) protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbgw
Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:
bbgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbgw03032
]
UT28_C0001G0885 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbgw03400
]
UT28_C0001G0885 (gyrA)
Enzymes [BR:
bbgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UT28_C0001G0885 (gyrA)
DNA replication proteins [BR:
bbgw03032
]
Prokaryotic type
DNA Topoisomerases
UT28_C0001G0885 (gyrA)
DNA repair and recombination proteins [BR:
bbgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UT28_C0001G0885 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AKM82662
UniProt:
A0A0G4B6L7
LinkDB
All DBs
Position
785794..788964
Genome browser
AA seq
1056 aa
AA seq
DB search
MADEQDKTNDEEITDADEKAEEVETEDSETSEPVDVSNLSEDELNPEKIAEEEAVFDFGA
ETDPDEKTDYGLMRPRTLEIEMQESYLSYAMTVIISRALPDVRDGLKPVHRRVLFSMHEL
GLSSKAKFRKCATVVGDVLGKYHPHGDVAVYDTLARMAQDFSMRYRLVDGQGNFGSIDGD
SPAAMRYTEARMASMAEELLTDIEKDTVDFVPNYDGTRQEPRVLPSRVPNLLLNGAMGIA
VGMATNIPPHNLTEIIDGTIHVIDNPECTVEDLMQFVKGPDFPTGAEIYGLEQIKAAYTM
GKGSIVMRAVANIEEVKRGGFRIIISEIPYQVNKAELILKIADLVKDKRIDGISGLRDES
DRTEGVRIVIDLKSSAYPKKILNRLYDLTPMQTAFHVNMLALIDGIQPRVLTLKNVLEEY
VKHRQKVIRRRVEYDLRKAKERAHILEGLRIALARIDEVITVIKKSANREEALKALVEKF
ELTLIQGGAILDMRLSALAALEVKKIEDEYQALLKFIGECETILSDEKKILAIIKKELIE
VRDKFKSERKTKIFDQEIGKFRAEDLIPSEQVIVMLSKGNYIKRMPVSAYRSQVRGGKGV
MGMETKEEDTIEHLVAANTHDDVLFFTDRGRLFQAKVYDIPSASRISKGQALVNILQMSP
DEKVTAVITLDAKNEALKYFVMATEKGVIKKTEIELYKNVRKTGIVAIKLGAGDKLKWVK
TTSGTDKIFMASSRGQSILYNETDIRPMGRSAAGVRGILLKGEDKAVGIDVILPSLEEKA
FVLVVMENGLGKRTPLTHFKVQLRGGMGIRVAAVTARTGKVVAMHVVYGDKVDVILATKN
GQMIRMPMDTIKILSRDTQGVTLVKLKDNDKVASVTVVTKSAEELVQQIPGEEAVVQVPQ
KEDRPVQEVPKLQEFDTKAEIEREAEEMKLHSDVGEGPDDDDSGESGTASEESGTADDKN
IKAQSKKTAEGDKIVKDEYSKQVEVKKTDKLPEWAKSHKDTWREPSVTKLGKTKVHDYKE
GDVPNPEDLKKNLKKSEPEDQNYWGAKGDKGQGNLF
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaacaagataaaacaaacgacgaagaaataacagatgcagacgaaaaagcg
gaagaagtagaaacggaagattctgaaacttcagaaccagtggacgtttctaacctttca
gaagacgaattaaatccggaaaaaattgcagaagaagaggccgtttttgattttggcgca
gagacagatccggatgaaaaaaccgactatggtttgatgcgcccgcgtaccctggaaatc
gaaatgcaggagtcgtatctttcctatgccatgactgttattatttcgcgtgctttgcca
gacgttcgtgacggcttaaaaccagttcaccgtcgggttctgttttccatgcatgaatta
ggactaagttcaaaagctaaattcaggaaatgtgccactgtggttggagacgttttgggt
aagtatcatccacatggtgacgttgcggtttatgacactttagctcgtatggctcaggac
ttttcaatgcgttacagattagtcgatggtcaaggaaactttggttcgattgacggtgat
tctccggctgccatgcgttacactgaagcccgaatggcatcgatggccgaagaattattg
accgatattgaaaaggatacggttgattttgtgccgaactatgatggcacaagacaagaa
ccaagagttttaccttcacgtgtgcctaacctcttattaaatggagccatgggtattgct
gtgggtatggcgaccaatattccaccgcataatctaaccgaaataatcgacggcactatt
cacgtaatcgataatcctgaatgtactgtcgaagacttgatgcaatttgtcaaaggaccg
gattttccaaccggtgccgaaatctatggtttggaacagattaaggccgcttataccatg
ggtaaggggagtattgtgatgcgagctgtggccaacattgaagaagtaaagcgcggcggt
tttcgtattattatttctgaaattccttaccaggtaaataaagctgagttgattttgaaa
attgccgatttggttaaagataaaagaattgacggcatttccggacttcgcgatgaatct
gacagaactgaaggtgtccgtattgttatcgatctgaaatcatcggcctatccaaagaaa
attttgaatcgcttatatgatttaacgccaatgcaaactgccttccatgttaatatgttg
gcattaatcgacggcattcaaccgcgtgttttaaccttgaaaaacgttttggaagaatat
gttaagcatcgtcaaaaagtcattcgccgtcgggtagaatatgatttaagaaaagccaaa
gagcgtgctcatattttggaaggcttgagaattgccctggctcgaattgatgaagttatt
actgtaattaaaaagagtgccaatcgtgaggaagccttaaaagctttggtggaaaaattt
gagttaactctcattcaaggtggcgccattttggatatgagactttccgccttggccgct
ttggaagttaaaaaaattgaagatgaatatcaggccttattaaaattcattggtgaatgc
gaaaccattttgagcgacgaaaagaaaatcctcgctattattaaaaaagaattaattgaa
gtccgcgataagtttaagagcgaacgcaagaccaaaatattcgatcaagaaatcggtaag
ttccgcgccgaagatttaattccttcagagcaggtaatcgtgatgctttcaaaaggaaat
tacatcaaacgtatgccggtttcagcttaccgtagtcaagttcgtggcggtaaaggtgtt
atgggtatggaaaccaaagaagaagataccatcgaacatttagtggcagccaatactcac
gacgatgttttgttttttaccgatcgcggccgcttattccaagccaaagtttatgatatc
ccgtcggcttcgcgtatttccaaaggtcaggcattggtaaatattttacaaatgtcgccg
gatgagaaagtgacagctgttattactttggatgccaaaaacgaagctttgaaatacttt
gtcatggctacggaaaaaggcgtgattaaaaaaacagaaatcgaactttataaaaatgtt
cgaaaaaccggtattgttgctattaaattgggtgccggtgataaattgaagtgggtaaaa
accacctcaggcacagacaagatttttatggcttctagccgaggccaatcgattctatat
aacgaaacagatatccgcccaatgggtcgcagcgccgccggtgttcgtggaattttactg
aagggtgaagataaagctgttggcatcgatgtgattttaccaagcctggaagaaaaagca
ttcgttttggtcgttatggaaaacgggctaggtaagcgcaccccattaacgcattttaag
gttcagctccgtggtggtatgggaattcgtgtggctgcggttactgccagaactggtaaa
gttgtggctatgcatgtggtttatggcgataaagttgacgtcattttagctaccaagaat
ggtcagatgattcgaatgccaatggatacaattaaaattttaagtcgagatacacaaggc
gttacgctggtaaaactaaaggataatgataaagtcgcttcggttacggttgtaacaaag
agtgccgaggaattagttcagcaaattccaggagaagaagctgttgttcaagtgccgcaa
aaagaagatcgtccagttcaggaagtaccaaagcttcaagaatttgacactaaggccgaa
attgaacgagaagcggaagaaatgaaactacactccgatgttggtgaagggccagatgac
gacgattctggagaatcgggaacagcttcggaagaatcgggaacagctgatgataaaaat
ataaaagctcagagtaaaaaaactgcagaaggcgacaaaattgttaaagatgaatattcc
aagcaagttgaagtaaagaaaactgataagttgcccgagtgggctaaatcacacaaagat
acttggcgtgaaccttcggtaaccaaattagggaagactaaagttcacgactacaaggaa
ggtgatgtcccaaaccctgaagatttgaaaaaaaatctgaagaagtcagaaccagaagat
cagaattattggggtgccaaaggtgataaaggacaaggcaatttgttctaa
DBGET
integrated database retrieval system
