Bordetella bronchiseptica 253: BN112_0101
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Entry
BN112_0101 CDS
T02344
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN112_0101 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbh03400
]
BN112_0101 (uvrB)
DNA repair and recombination proteins [BR:
bbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN112_0101 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN112_0101 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
DUF87
AAA_22
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CCJ52019
UniProt:
A0A0C6P150
LinkDB
All DBs
Position
83693..85720
Genome browser
AA seq
675 aa
AA seq
DB search
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMAN
MIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRRE
VLARLVAMQYTRNDADFTRGVFRVRGETIDIFPAESPELALRLTLFDDEIESLELFDPLT
GRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMY
RGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQV
VRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVR
VRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKA
VRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARD
ALNALKSRLLLDGVG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcctggattcgtcgaattccccgatagcccgtttcacctctatcagccgtac
cctcccgcgggcgaccagccgggagcgatcgacgcgttgaccgagggcgtctcggacggc
ctgatgttccagacgctgctgggcgtgacgggctcgggcaagacctacaccatggccaac
atgatcgcccgcctgggccgtccggccctggtgcttgcgcccaacaagaccctggccgcc
cagctgtacgccgaaatgcgcgaattcttcccccgcaacgcggtggagtatttcgtgtcg
tactacgactattaccagcccgaagcctacgtgccgacccgcgacctcttcatcgagaag
gattcgtcgatcaacgagcacatcgagcagatgcgcctgtcggccaccaagagcctgctg
gagcgccgcgatacggtcatcgtgggcaccgtctcgtgcatctacggtatcggcaatccg
ggcgactaccatgccatggtcctgatcctgcgcaccggcgaccggatttcccggcgcgag
gtgctggcgcggctggtggccatgcagtacacccgcaacgacgcggacttcacgcgcggc
gtcttccgggtgcgcggcgagaccatcgacatcttcccggcggaaagccccgagctcgcg
ctgcgcctgacgctgttcgacgacgaaatcgagtcgctggagctgttcgatcccctgacc
gggcgcgtgaggcagaagctgccgcgctttacggtatacccgggctcgcactacgtgacg
ccgcgcgaaaccgtgctgcgcgcgatcgagaccatcaaggaagaactgcgcgagcggctg
gcccagctgatcgccgacggcaagctggtggaggcgcagcggctcgaacagcgcacccgc
ttcgatctggaaatgctgcaggagctgggcttttgcaagggcatcgagaactattcgcgg
cacttgtccggcgcggcgccgggcgagccgccgcccaccctgatcgattacctgccggcc
gacgcgctgatgttcatcgacgaaagccacgtcaccatcgggcagctcggcggcatgtac
cgtggcgaccgttcgcgcaaggaaaccctggtgcagtatggcttccggctgccgtcggcg
ctggacaaccggcccctgcgcctggaggagttcgaggcgcgcatgcgccagtgcgtgttc
gtgtcggccacgccggccgcctacgagcaggagcacgccgataacgtggtcgagcaggtg
gtgcggccgaccgggctggtcgatccgatcgtcgaggtgcgtccggcgcacacccaggtc
gacgacctgctgggcgagatccacaagcgggcggcgctgcaggagcgcgtgctggtcacg
acgctgaccaagcgcatggccgaggacctgaccgacttcctgtccgagcacggagtgcgg
gtgcgctacctgcattcggacatcgataccgtcgaacgggtggaaatcatccgcgacctg
cggctgggcgtcttcgacgtgctggtgggcatcaacctgctgcgcgagggcctggatatc
cccgaggtgtcgctggtggccatcctggatgccgacaaggaaggcttcctgcgatccgag
cgcagcctgatacagacgataggccgggccgcccgcaacctgaatggccgggccattctc
tacgccgaccgcataaccgactcgatgcggcgtgccatcgacgagaccgagcggcgcagg
gccaagcagatccagcacaacaccgaccacggcatcaccgcgcgcggggtcagcaaggcc
gtgcgcgaactgatcgatggggtggtggcgccggccggccatgacgcgctggaatccgcc
gtgcccgccgaggtgctgaccgacgagaaagccatggcgcgcgagatccggcgcctggaa
aagctgatgatggatcacgcccgcaacctggaattcgagcaggccgccgcggcacgcgat
gcgctcaacgctctcaagagtcggttgctgcttgatggcgtaggttag
DBGET
integrated database retrieval system
