Bordetella bronchiseptica 253: BN112_0124
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Entry
BN112_0124 CDS
T02344
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh03410
Base excision repair
bbh03430
Mismatch repair
bbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN112_0124 (recJ)
03430 Mismatch repair
BN112_0124 (recJ)
03440 Homologous recombination
BN112_0124 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbh03400
]
BN112_0124 (recJ)
DNA repair and recombination proteins [BR:
bbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BN112_0124 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN112_0124 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN112_0124 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CCJ52042
UniProt:
A0A0C6P0F6
LinkDB
All DBs
Position
complement(105594..107162)
Genome browser
AA seq
522 aa
AA seq
DB search
MAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADV
DFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITD
HHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRL
DALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFD
LGFALGPRINAAGRLADMSLGIACLTTDDEAQALEMARELDNINRERRTIEAEMRDQALA
AMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPD
VHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPL
LETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQ
RFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcccgcgctgctgccgcccgaccgcctgacccactcggcccacgcggccgcc
gtgctcgccgacgccatcgagcagggcaagcgcctgctcatcgtggccgactacgactgc
gatggcgccacggcctgcgcggtcggcctgcgcgccctgtcggccatgggcgccgacgtg
gatttcctggttcccaaccgcttcgagaccggctatggcctctcgccggcggtcgtcgag
ctggcctgccgccatcggcgcggcaagcccgacatcatcatcacggtcgacaacggcatc
gccagcgtcgacggcgtggccgccgccaacgccgccggcatcggcgtggtcatcaccgac
caccacttgcccggcgacacgctgcccgaggccctggccatcgtcaatcccaaccagccc
ggctgcggtttcggctccaagcacctggccggcgtcggcgtcattttctacatgatgctg
gcgctgcgcgccgagctgcgccgccgcggcgtctacgcgccggatggcggcccgcgcctg
gatgcgctgtccgacctggtggccctgggcacggtggccgacgtggtcaagctggacgcc
aacaaccggctgctggtcacgcaggggctgcagcgcatgcgggccggccgcatgcagccc
ggcgtgcgcgccctgttcgccgtggccgggcgcgagccgcgcaccgccagcggcttcgac
ctgggctttgccctcggtccgcgcatcaacgccgccggccggctggccgacatgagcctg
ggcatcgcctgcctgaccaccgacgacgaggcgcaggcgctcgaaatggcgcgcgagctc
gacaacatcaaccgcgaacgccgcaccatcgaagccgagatgcgcgaccaggcgctggcc
gccatggaggcgcccgacgccgccgccggcgccacggtatgcgtattcgaccccggctgg
caccagggcgtggtcggcctggtggcctcgcgcctgaaagagaagttctggcgccccacg
ctggccttcgccccggccggcgaggacgagctgcgcggctcgggccgctcgatccccgac
gtgcatttgcgcgacgcgctcgacctggtgtccaagcgccacccgggcctgatacgcaag
ttcggcggccacgccatggccgccggcctgaccctgggcagcggcgatttcgccgccttc
gccccggccttcgacgccgcggtgcgcgaactcaccgggcgcgaccgcttcgagccgctg
ctcgaaaccgacggctcgctcgaaagcggctacgccaatgccgaggtggccggcctgctg
cagcagcaggtctggggcgcggggttcgccgccccgctgttcctggacgaattcaccgtg
cgcagccagcgcctggtgggcggcaagcacctgaagctggcgctcgagcgcggccaccag
cgcttcgacgccatctggttcggccacgaccagtccctgcccgagcgcatccaggccgcc
taccggctggagcagaacatctggaatggcatggtgtcggtacagctggtcatcgagcac
gccgcctga
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integrated database retrieval system
