Bordetella bronchiseptica 253: BN112_0642
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Entry
BN112_0642 CDS
T02344
Name
(GenBank) Conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbh
Bordetella bronchiseptica 253
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbh03032
]
BN112_0642
03400 DNA repair and recombination proteins [BR:
bbh03400
]
BN112_0642
Enzymes [BR:
bbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN112_0642
DNA replication proteins [BR:
bbh03032
]
Prokaryotic type
DNA Topoisomerases
BN112_0642
DNA repair and recombination proteins [BR:
bbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN112_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCJ52560
UniProt:
A0A0C6P034
LinkDB
All DBs
Position
659377..660402
Genome browser
AA seq
341 aa
AA seq
DB search
MSPAAPAALRYVDDSRPGLARRRLPGGKFAYYDANGRRVRDPGTLARIAALAIPPAYREV
WICARADGHLQATGRDARGRKQYRYHPDWRAWRDAAKYGQLREFGRALPRIRRRVARDLS
SRGLAPDKVAATVVRLLETTLARVGSRAYARENGSFGLTTVTRRHAWLQGSRLRLRFTGK
SGVAHDVTVRDRRIARVVKRCLDLPGQQLFHYLDEDGEPRPVDSELINAYLREAGGGDFT
AKHYRTWAASALALALLVRWPATDAAARRAAVVEVVKLVAARLANTPAVCRACYIHPGIV
QAYLDGALPAGGAAPAGPRGLAADERRLLAFVAAWPHSEDR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcggcgcccgccgcgctgcgctatgtggacgacagccgtcccggcctggcg
cgccgccggctacccggcggaaagttcgcctactacgatgcgaacggccgccgggtgcgc
gatcctggcacgctggcgcgcatcgcggcgctggccattcctcccgcctatcgcgaagtg
tggatctgcgcgcgggccgacggccatctgcaggccaccgggcgcgacgcccgcggccgc
aagcaataccgctaccaccccgactggcgggcctggcgcgacgcggccaagtacggccag
ctgcgcgagttcggccgcgccctgccgcgcatccggcgccgcgtggcgcgcgacctgtcc
agccgcggcctggcgccggacaaggtcgccgccacggtggtgcgcctgctcgaaaccacg
ctggcgcgggtcggcagccgcgcgtacgcgcgcgagaacggctcgttcggcctgaccacc
gtcacgcgccgccatgcctggctgcagggcagccggctgcgcctgcgcttcaccggcaag
agcggcgtggcacacgatgtcaccgtacgcgaccgccgcatcgcgcgcgtggtcaagcgc
tgcctggacctgcccgggcaacagctgttccattacctggacgaggacggcgagccgcgc
ccggtggactcggaactgatcaacgcctatttgcgcgaggccggcggcggcgatttcacc
gccaagcactaccggacctgggccgcctccgcgctggcgcttgcgctgctggtgcgctgg
ccggccacggacgccgcggcgcgccgcgcggccgtggtcgaggtcgtcaagctggtggcc
gcccgcctggccaacacgccggcggtgtgccgcgcctgctacatccatcccggcatcgtc
caggcctacctggacggcgccttgccggcgggcggcgccgcgccggccgggccgcgcggg
ctggccgccgacgaacgccgcctgctggccttcgtggcggcctggccgcactcagaagat
cgatga
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