KEGG   Bordetella bronchiseptica 253: BN112_0646
Entry
BN112_0646        CDS       T02344                                 
Name
(GenBank) putative membrane protein
  KO
K10979  DNA end-binding protein Ku
Organism
bbh  Bordetella bronchiseptica 253
Pathway
bbh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BN112_0646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbh03400]
    BN112_0646
DNA repair and recombination proteins [BR:bbh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BN112_0646
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: CCJ52564
UniProt: A0A0C6P2Y9
LinkDB
Position
661523..662449
AA seq 308 aa
MMARIVWKGAIAFGLVHVPIVVHAASRPSRLDFDWIDRRDNAPVGYQRINKRTGRAIDGE
HIVKGYEYEKGEYVYMNDEDFARANVAATQTVEILDFVKAEEVPLYYFDTPYYLAPDRRG
GPGYALLHRALRDSGRIGIAQVVLHTRQHLAAVMPVGEVLMLVTMRYADEIVPAEEFGLD
DAATHDRPGARELRMAMRLLDDMTCKWDPAQYRDAYRDDLLAAIDRKVRAGKTHELAEPG
EAAPRASAKVIDLAAMLQQSLERGKRRAGAPAPPAKKAAPARKATAKGAAAKRARKTPAR
RAPARKAA
NT seq 927 nt   +upstreamnt  +downstreamnt
atgatggccagaatcgtctggaaaggcgcgatcgcgttcgggctggtgcacgtgcccatc
gtggtccatgcggcaagccgccccagccggctcgatttcgactggatcgaccggcgcgac
aatgcgccggtgggctaccagcgcatcaacaagcgcaccggccgcgcgatcgatggcgaa
catatcgtcaagggctacgaatacgagaaaggcgaatacgtctacatgaacgacgaggat
ttcgcccgcgccaacgtcgccgccacgcagaccgtggagatcctcgacttcgtcaaggcc
gaggaagtgccgctgtattacttcgacacgccgtactacctggcgcccgaccggcgcggc
gggccaggctacgcgctgctgcaccgcgccctgcgcgacagcggccgcatcggcattgcc
caggtcgtgctgcacacgcgccagcacctggcggccgtgatgccggtgggcgaggtgctg
atgctggtcaccatgcgctacgccgacgagatcgtgccggccgaggaattcggcctggat
gacgcggccacgcacgacaggcccggcgcgcgcgaactgcgcatggccatgcgcctgctc
gacgacatgacgtgcaagtgggaccccgcgcaataccgcgacgcctatcgcgacgacctg
ctggccgccatcgacaggaaagtgcgcgccggcaagacgcatgagctggccgagccgggc
gaagccgcgccgcgcgccagcgccaaggtcatcgacctggcggccatgctgcaacagagc
ctggagcgcggcaagcggcgcgccggcgcgcccgcgcccccggcgaaaaaggccgcgccg
gcccgcaaagccacggccaagggcgccgccgccaagcgggcgcgcaagacgcccgcgcgg
cgcgccccggcccgcaaggcggcctga

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