Bordetella bronchiseptica 253: BN112_1266
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Entry
BN112_1266 CDS
T02344
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh00541
Biosynthesis of various nucleotide sugars
bbh01100
Metabolic pathways
bbh01250
Biosynthesis of nucleotide sugars
Module
bbh_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN112_1266 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bbh01005
]
BN112_1266 (rfaD)
Enzymes [BR:
bbh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BN112_1266 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bbh01005
]
Core region
BN112_1266 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
CCJ53184
UniProt:
A0A0C6P4X4
LinkDB
All DBs
Position
complement(1362306..1363295)
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AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTDGDKFRNLVDCSIADYLDKDEFRERV
RGGNLPALRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEYCQAERVPFLYASSAAVYG
GSSVYVEDPANEHPLNVYGYSKLLFDQVLRTRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFAGWDGYEDGGQSRDFISVEDVVAVNLHFLDNPGQSGVFNCG
TGRAQPFNDVAAAVVNTLRAERGEAALPLAELVKKGLLRYIPFPDDLKGRYQSYTQADVG
RLRAAGFSAPMRDVQTGVSEYVRYWRALK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtgaccggcgcggccggctttatcggcagcaacctggtgcgcggcctgaac
cggcgcggcatccaggacatcatcgccgtcgacgacctgaccgacggcgacaaattccgc
aacctcgtcgattgcagcatcgccgactatctcgacaaggacgagttccgcgaacgcgtg
cgcggcggcaacctgccggccttgcgtgccgtgctgcaccagggcgcctgctcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactgttc
gagtactgccaggccgagcgcgtgccgttcctgtacgcctcgtcggccgcggtctacggc
ggttcgtcggtctatgtggaagacccggccaacgagcatccgctcaatgtctacggctat
tccaagctgctgttcgaccaggtgctgcgcacgcgcatggacagcctgaccgcccaggtg
gtggggctgcgctatttcaacgtgtacgggccgcacgagcagcacaagggccgcatggct
tcggtggccttccacaacatgaaccagttcctggccgaaggccatgtgcgcctgttcgcc
ggctgggatggctacgaggacggcgggcagagccgcgatttcatttcggtcgaggacgtg
gtggcggtcaatctgcatttcctcgacaaccctggccagtcgggcgttttcaactgtggc
accgggcgcgcccagccgttcaacgacgtggccgcggcggtggtcaataccctgcgcgcc
gaacgcggcgaggcggcgctgccgctggccgaactggtcaagaaaggcctgctgcgctat
atcccgttcccggatgatctgaaagggcgctaccagagctacacccaggccgacgtcggc
cggctgcgggcggccggcttcagcgcgccgatgcgcgatgtacagactggcgtatcggaa
tacgtgcgctattggcgcgccctgaagtag
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